RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FEN1P39748 380 aaKnown RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 ATP4BP51164 291 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PGDP52209 483 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 MAPK12P53778 367 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 SLC26A5P58743 744 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 IRX1P78414 480 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 RHDQ02161 417 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 TGM3Q08188 693 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 NFATC3Q12968 1075 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 KLF10Q13118 480 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 DUSP8Q13202 625 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 KIAA0040Q15053 153 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 NADK2Q4G0N4 442 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PRR30Q53SZ7 412 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF385BQ569K4 471 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 ACAD11Q709F0 780 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 LARP4Q71RC2 724 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 NDUFAF7Q7L592 441 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 TRIM46Q7Z4K8 759 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 APLFQ8IW19 511 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CLEC1AQ8NC01 280 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PLPP5Q8NEB5 264 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CEP70Q8NHQ1 597 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 DNAJB14Q8TBM8 379 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PTPMT1Q8WUK0 201 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 NCLNQ969V3 563 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 EXOSC8Q96B26 276 aaKnown RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 C19orf60Q96EN9 201 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CATSPER2Q96P56 530 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 TSSK3Q96PN8 268 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 UBL7Q96S82 380 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 BTBD10Q9BSF8 475 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CADM1Q9BY67 442 aaKnown RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 HES7Q9BYE0 225 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 ALOXE3Q9BYJ1 711 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 RPF2Q9H7B2 306 aaKnown RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 LRTM1Q9HBL6 345 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 SLAMF7Q9NQ25 335 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 MRGBPQ9NV56 204 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 LYARQ9NX58 379 aaKnown RBP7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PTGFRNQ9P2B2 879 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CES1P1Q9UKY3 287 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 STK38LQ9Y2H1 464 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 CROCCQ5TZA2 2017 aa7.38□□□□□ -1.23
CCDC40-215ENST00000576033 GCN1Q92616 2671 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SPTA1P02549 2419 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 A0A088AWK7 358 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 GNG14A0A1W2PPG7 69 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 A0A1W2PQ72 361 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 A8MUI8 341 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 C17orf105B2RV13 164 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 E9PBE3 544 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 GSC2O15499 205 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 AKAP10O43572 662 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 KLHL41O60662 606 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF354AO60765 605 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 CTNSO60931 367 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SEC22BO75396 215 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ERAL1O75616 437 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 RSL1D1O76021 490 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 DDAH2O95865 285 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 IFNA16P05015 189 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ANXA4P09525 319 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ESRRAP11474 423 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 HSD3B1P14060 373 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF10P21506 573 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 HSD3B2P26439 372 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 PIK3R1P27986 724 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SSTR4P31391 388 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ERVK-8P63133 956 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SKP1P63208 163 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 MRPS35P82673 323 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ACSM2AQ08AH3 577 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 STX4Q12846 297 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 PTGR1Q14914 329 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 MPEG1Q2M385 716 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SPIN4Q56A73 249 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF468Q5VIY5 522 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM198Q66K66 360 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ACSM2BQ68CK6 577 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 OGFOD2Q6N063 350 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 NOXRED1Q6NXP6 359 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 FAM111BQ6SJ93 734 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 RINLQ6ZS11 566 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 MED25Q71SY5 747 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 HOMEZQ8IX15 550 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF595Q8IYB9 648 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 C10orf67Q8IYJ2 551 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 LIX1Q8N485 282 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 KRTCAP2Q8N6L1 136 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM102Q8N9M5 508 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 APCDD1LQ8NCL9 501 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 RBM15BQ8NDT2 890 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 CATSPER1Q8NEC5 780 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SRFBP1Q8NEF9 429 aaKnown RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 ADCY4Q8NFM4 1077 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
CCDC40-215ENST00000576033 C9orf43Q8TAL5 461 aaPredicted RBP7.37□□□□□ -1.23
CCDC40-215ENST00000576033 SLC2A12Q8TD20 617 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms