RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 LGI4Q8N135 537 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 THAP3Q8WTV1 239 aaPredicted RBP14.17□□□□□ -0.14
LITAF-217ENST00000575426 HAS2Q92819 552 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 PNPLA2Q96AD5 504 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 TUBGCP3Q96CW5 907 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 C19orf60Q96EN9 201 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 SENP5Q96HI0 755 aaPredicted RBP14.17□□□□□ -0.14
LITAF-217ENST00000575426 C20orf27Q9GZN8 174 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.17□□□□□ -0.14
LITAF-217ENST00000575426 MYNNQ9NPC7 610 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 MIEF1Q9NQG6 463 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 PLA2G3Q9NZ20 509 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 HEY2Q9UBP5 337 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 CES1P1Q9UKY3 287 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 ENTPD4Q9Y227 616 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 B3GNT3Q9Y2A9 372 aa14.17□□□□□ -0.14
LITAF-217ENST00000575426 BOD1L1Q8NFC6 3051 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 ATP6AP2A0A1C7CYW4 349 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 CDK2AP1O14519 115 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 SUV39H1O43463 412 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 ATP6AP2O75787 350 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 SASH3O75995 380 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 DDAH2O95865 285 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 FEN1P39748 380 aaKnown RBP14.16□□□□□ -0.14
LITAF-217ENST00000575426 ASMTP46597 345 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 GPR143P51810 404 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 MAD2L1Q13257 205 aaPredicted RBP14.16□□□□□ -0.14
LITAF-217ENST00000575426 SPRED3Q2MJR0 410 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 RFTN2Q52LD8 501 aaPredicted RBP14.16□□□□□ -0.14
LITAF-217ENST00000575426 SLC6A19Q695T7 634 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 ZNF605Q86T29 641 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 GALNT12Q8IXK2 581 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 BEST3Q8N1M1 668 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 OR5L2Q8NGL0 311 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 EXOSC8Q96B26 276 aaKnown RBP14.16□□□□□ -0.14
LITAF-217ENST00000575426 FBXL20Q96IG2 436 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 BBS4Q96RK4 519 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 SORT1Q99523 831 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 UTP23Q9BRU9 249 aaKnown RBP14.16□□□□□ -0.14
LITAF-217ENST00000575426 RNF32Q9H0A6 362 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 PNPOQ9NVS9 261 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 EHD3Q9NZN3 535 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 HAO1Q9UJM8 370 aa14.16□□□□□ -0.14
LITAF-217ENST00000575426 GABRR3A8MPY1 467 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 WDPCPO95876 746 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 F10P00742 488 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 DDX5P17844 614 aaKnown RBP14.15□□□□□ -0.14
LITAF-217ENST00000575426 DDCP20711 480 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 MPIP34949 423 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 MLF1P58340 268 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 ERVK-8P63133 956 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 TLR1Q15399 786 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 ZNF750Q32MQ0 723 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 PLEKHN1Q494U1 663 aaPredicted RBP14.15□□□□□ -0.14
LITAF-217ENST00000575426 XKR7Q5GH72 579 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 COLEC12Q5KU26 742 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 FAM71E1Q6IPT2 247 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 RNF111Q6ZNA4 994 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 DGAT2L6Q6ZPD8 337 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 Q6ZS92 163 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 SLC29A4Q7RTT9 530 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 LRRC25Q8N386 305 aaPredicted RBP14.15□□□□□ -0.14
LITAF-217ENST00000575426 HORMAD2Q8N7B1 307 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 FNDC5Q8NAU1 212 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 OR8K3Q8NH51 312 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 LRRC8CQ8TDW0 803 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 DOK4Q8TEW6 326 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 ZNF721Q8TF20 911 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 ZNF75CPQ92670 426 aaPredicted RBP14.15□□□□□ -0.14
LITAF-217ENST00000575426 PPP1R36Q96LQ0 422 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 C3orf30Q96M34 536 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 BRINP2Q9C0B6 783 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 SLC35C2Q9NQQ7 365 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 INTS9Q9NV88 658 aaKnown RBP14.15□□□□□ -0.14
LITAF-217ENST00000575426 ERVK-19Q9WJR5 959 aa14.15□□□□□ -0.14
LITAF-217ENST00000575426 EIF3LQ9Y262 564 aaKnown RBP14.15□□□□□ -0.14
LITAF-217ENST00000575426 SPTA1P02549 2419 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 KALRNO60229 2985 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 TRAV17A0A0B4J275 112 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 OR5H15A6NDH6 313 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 TTLL8A6PVC2 850 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 SLCO1B7G3V0H7 640 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 KLF11O14901 512 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 SLC28A2O43868 658 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 SNNO75324 88 aaPredicted RBP14.14□□□□□ -0.15
LITAF-217ENST00000575426 VPS4BO75351 444 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 ATP1B1P05026 303 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 KITP10721 976 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 PRPS2P11908 318 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 SDC1P18827 310 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 CD97P48960 835 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 RNF4P78317 190 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 OC90Q02509 493 aaPredicted RBP14.14□□□□□ -0.15
LITAF-217ENST00000575426 ZNF169Q14929 603 aaPredicted RBP14.14□□□□□ -0.15
LITAF-217ENST00000575426 HSP90B2PQ58FF3 399 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 C6orf136Q5SQH8 315 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 TICAM1Q8IUC6 712 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 CCDC116Q8IYX3 515 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 TMEM156Q8N614 296 aa14.14□□□□□ -0.15
LITAF-217ENST00000575426 ZNF321PQ8N8H1 164 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms