RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ATP1B1P05026 303 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 SLC35E2P0CK97 266 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 ALOX15P16050 662 aaPredicted RBP8.04□□□□□ -1.12
SMG6-216ENST00000575176 TACR1P25103 407 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 SERPINB3P29508 390 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CCT5P48643 541 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 HLCSP50747 726 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CLCN2P51788 898 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 RNF4P78317 190 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PHEXP78562 749 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PLIN5Q00G26 463 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 FUT7Q11130 342 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 MPEG1Q2M385 716 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PRICKLE4Q2TBC4 344 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 ZNF766Q5HY98 468 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 FHL5Q5TD97 284 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 FAM180BQ6P0A1 224 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 SCIMPQ6UWF3 145 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CCNYL1Q8N7R7 359 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 GBP7Q8N8V2 638 aaPredicted RBP8.04□□□□□ -1.12
SMG6-216ENST00000575176 ST6GALNAC3Q8NDV1 305 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 NUBPLQ8TB37 319 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 METTL6Q8TCB7 284 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 FAR1Q8WVX9 515 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 TANKQ92844 425 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 ATP6V1E2Q96A05 226 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 CCDC126Q96EE4 140 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 SENP5Q96HI0 755 aaPredicted RBP8.04□□□□□ -1.12
SMG6-216ENST00000575176 PKNOX2Q96KN3 472 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 OR8D2Q9GZM6 311 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PROK2Q9HC23 129 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 SSU72Q9NP77 194 aaKnown RBP8.04□□□□□ -1.12
SMG6-216ENST00000575176 SLAMF7Q9NQ25 335 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 STMN3Q9NZ72 180 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 MAT2BQ9NZL9 334 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 ABI3Q9P2A4 366 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 MYOTQ9UBF9 498 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 VPS29Q9UBQ0 182 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 DLGAP4Q9Y2H0 992 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 STK38LQ9Y2H1 464 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 DNAJC15Q9Y5T4 150 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PCNX1Q96RV3 2341 aa8.04□□□□□ -1.12
SMG6-216ENST00000575176 PCNX3Q9H6A9 2034 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 NINQ8N4C6 2090 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 DYTNA2CJ06 578 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 B4DXG7 233 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 PCDH7O60245 1069 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 NPHS1O60500 1241 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 TRIM13O60858 407 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ULK1O75385 1050 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 SLC25A12O75746 678 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 OR2J2O76002 312 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 RSL1D1O76021 490 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 PSMG1O95456 288 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 KRT6AP02538 564 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 KRT6BP04259 564 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 BPGMP07738 259 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 IL3P08700 152 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 EDN3P14138 238 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 CPMP14384 443 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 SSTR4P31391 388 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 BUD31P41223 144 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 SOX3P41225 446 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 KRT6CP48668 564 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 MAPK12P53778 367 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 ERVK-8P63133 956 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ACTN3Q08043 901 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 RCN2Q14257 317 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 LTB4RQ15722 352 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ZNF791Q3KP31 576 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 ZNF628Q5EBL2 1059 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 IRAK1BP1Q5VVH5 260 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 FAM71E1Q6IPT2 247 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 CYP20A1Q6UW02 462 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 GALNTL5Q7Z4T8 443 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 TMEM132CQ8N3T6 1108 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 CPSF7Q8N684 471 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 THAP3Q8WTV1 239 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 RNF138Q8WVD3 245 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 SREK1Q8WXA9 508 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 DAZLQ92904 295 aaKnown RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 ADIPOR1Q96A54 375 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ZBTB9Q96C00 473 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 TLCD1Q96CP7 247 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 PGM2Q96G03 612 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 C3orf30Q96M34 536 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 SORT1Q99523 831 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 TRMOQ9BU70 441 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 EBPLQ9BY08 206 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 SHCBP1LQ9BZQ2 653 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 WWTR1Q9GZV5 400 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 RRAGDQ9NQL2 400 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 GIMAP2Q9UG22 337 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ERRFI1Q9UJM3 462 aaPredicted RBP8.03□□□□□ -1.12
SMG6-216ENST00000575176 HAO1Q9UJM8 370 aa8.03□□□□□ -1.12
SMG6-216ENST00000575176 ERVK-19Q9WJR5 959 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms