RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 DACT3Q96B18 629 aaPredicted RBP13.7□□□□□ -0.22
SMG6-215ENST00000574501 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 KLHL15Q96M94 604 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 LINC00052Q96N35 136 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 P2RY13Q9BPV8 354 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 POLR2J3Q9H1A7 115 aaKnown RBP13.7□□□□□ -0.22
SMG6-215ENST00000574501 ABCG5Q9H222 651 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 C1GALT1Q9NS00 363 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
SMG6-215ENST00000574501 EXTL2Q9UBQ6 330 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 AP1M2Q9Y6Q5 423 aa13.7□□□□□ -0.22
SMG6-215ENST00000574501 SOD1P00441 154 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 ADAP00813 363 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 SLC6A12P48065 614 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 SRP9P49458 86 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 ATP12AP54707 1039 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 RAB14P61106 215 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 WDR5P61964 334 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 ARF5P84085 180 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 CRYZQ08257 329 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 SYT14P1Q58G82 188 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 RPS26P11Q5JNZ5 115 aaPredicted RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 ANXA8L1Q5VT79 327 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 METAP1DQ6UB28 335 aaPredicted RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 TMEM91Q6ZNR0 172 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 RTL4Q6ZR62 310 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 KRT74Q7RTS7 529 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 KIAA0907Q7Z7F0 614 aaPredicted RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 ADGRG3Q86Y34 549 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 VRK3Q8IV63 474 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 GHITMQ9H3K2 345 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 ZFYVE1Q9HBF4 777 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 EMC7Q9NPA0 242 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 DNAJC11Q9NVH1 559 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 KCMF1Q9P0J7 381 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 FCF1Q9Y324 198 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 NPIPB8E9PQR5 432 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 STK25O00506 426 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 SEMA7AO75326 666 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 TOXO94900 526 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 CD160O95971 181 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 DHFRP00374 187 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 CHI3L1P36222 383 aaPredicted RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 BTG1P62324 171 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 SLC5A12Q1EHB4 618 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 ARMC12Q5T9G4 340 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 RAET1GQ6H3X3 334 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 FAM180BQ6P0A1 224 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 BHLHB9Q6PI77 547 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 LUZP2Q86TE4 346 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 RBM45Q8IUH3 476 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 ADGRF3Q8IZF5 1079 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 OR52N2Q8NGI0 321 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 ST8SIA4Q92187 359 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 SLC9A6Q92581 669 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 TINF2Q9BSI4 451 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 RBCK1Q9BYM8 510 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 MS4A7Q9GZW8 240 aaPredicted RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 RETREG1Q9H6L5 497 aa13.69□□□□□ -0.22
SMG6-215ENST00000574501 MRPL39Q9NYK5 338 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 TESQ9UGI8 421 aaKnown RBP13.69□□□□□ -0.22
SMG6-215ENST00000574501 LALBAP00709 142 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 HOXD10P28358 340 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 GKP32189 559 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 DCDC1P59894 354 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 MC1RQ01726 317 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 EEF1A2Q05639 463 aaKnown RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 PUDPQ08623 228 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 IKZF1Q13422 519 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 DOC2AQ14183 400 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 CRB2Q5IJ48 1285 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 DCST1Q5T197 706 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 RNLSQ5VYX0 342 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 IL20RBQ6UXL0 311 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 HDDC2Q7Z4H3 204 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 MS4A15Q8N5U1 240 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 PLA2G15Q8NCC3 412 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 BEST4Q8NFU0 473 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 NEIL3Q8TAT5 605 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 MARC2Q969Z3 335 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 ZNF582Q96NG8 517 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 THAP7Q9BT49 309 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 C2orf49Q9BVC5 232 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 TM6SF2Q9BZW4 377 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 NT5DC2Q9H857 520 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 KCTD5Q9NXV2 234 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 NDOR1Q9UHB4 597 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 MBD1Q9UIS9 605 aaPredicted RBP13.68□□□□□ -0.22
SMG6-215ENST00000574501 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 GLYATL1P3A0A0U1RQE8 302 aa13.68□□□□□ -0.22
SMG6-215ENST00000574501 CD8B2A6NJW9 211 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms