RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SHISA6Q6ZSJ9 500 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 SAMD14Q8IZD0 417 aaPredicted RBP22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 OR9A2Q8NGT5 310 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 ADAMTS14Q8WXS8 1223 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 CLPTM1LQ96KA5 538 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 ANKRD27Q96NW4 1050 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 CDRT15Q96T59 188 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 NANOGQ9H9S0 305 aa22.56■■□□□ 1.2
ATPAF1-213ENST00000574428 AGXTP21549 392 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 IL10P22301 178 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 GPC1P35052 558 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 MTPNP58546 118 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 STX4Q12846 297 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 SELPLGQ14242 412 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 FAM199XQ6PEV8 388 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 BNC2Q6ZN30 1099 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 SCUBE1Q8IWY4 988 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 CACTIN-AS1Q8N1I8 211 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 ADCY4Q8NFM4 1077 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 OR5AK3PQ8NH89 298 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 STT3BQ8TCJ2 826 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 LRFN5Q96NI6 719 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 IKZF5Q9H5V7 419 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 NEUROD4Q9HD90 331 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 SPAG4Q9NPE6 437 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 NECTIN3Q9NQS3 549 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 SIRT3Q9NTG7 399 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 ADA2Q9NZK5 511 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 FOXJ2Q9P0K8 574 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 ACSL6Q9UKU0 697 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 CLDN16Q9Y5I7 305 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 NUP210LQ5VU65 1888 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 ONECUT2O95948 504 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 KLK3P07288 261 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 PGM1P36871 562 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 EFNA3P52797 238 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 RUNDC3AQ59EK9 446 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 OVCH1Q7RTY7 1134 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 LAPTM4BQ86VI4 370 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 TMEM151BQ8IW70 566 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 MR1Q95460 341 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 TMEM125Q96AQ2 219 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 MMADHCQ9H3L0 296 aaPredicted RBP22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 PCDHGA3Q9Y5H0 932 aa22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.55■■□□□ 1.2
ATPAF1-213ENST00000574428 SEC16AO15027 2179 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 CNOT1A5YKK6 2376 aaKnown RBP22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 IGLV3-12A0A075B6K2 115 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 TNFSF15O95150 251 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 OCA2Q04671 838 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 MLIPQ5VWP3 458 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 TMEM107Q6UX40 140 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 MED25Q71SY5 747 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 PPWD1Q96BP3 646 aaKnown RBP22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 PTCHD1Q96NR3 888 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 PHF12Q96QT6 1004 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 CPPED1Q9BRF8 314 aaPredicted RBP22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 SLC35A5Q9BS91 424 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 TMEM121BQ9BXQ6 578 aaPredicted RBP22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 TGIF2Q9GZN2 237 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 CHST8Q9H2A9 424 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 CMTM6Q9NX76 183 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 MKL2Q9ULH7 1088 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 CFAP54Q96N23 3096 aa22.54■■□□□ 1.2
ATPAF1-213ENST00000574428 DCDC2BA2VCK2 349 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 NME4O00746 187 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 PDE5AO76074 875 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 ZGLP1P0C6A0 271 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 ZCCHC18P0CG32 403 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 RHAGQ02094 409 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 SNCBQ16143 134 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 TMEM164Q5U3C3 297 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 SLC15A3Q8IY34 581 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 TRIML2Q8N7C3 387 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 RNF148Q8N7C7 305 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 PSMA8Q8TAA3 256 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 PNPT1Q8TCS8 783 aaKnown RBP22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 DOK4Q8TEW6 326 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 KAT2AQ92830 837 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 TSLPQ969D9 159 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 DPH2Q9BQC3 489 aaPredicted RBP22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 ALOXE3Q9BYJ1 711 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 VN1R1Q9GZP7 353 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 TMEM181Q9P2C4 612 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 MMACHCQ9Y4U1 282 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 CNOT3O75175 753 aaKnown RBP22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 ATP1B1P05026 303 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 IGLV3-21P80748 117 aaPredicted RBP22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 SPDYE7PQ495Y7 208 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 QSOX2Q6ZRP7 698 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 ARHGAP24Q8N264 748 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 GALNT15Q8N3T1 639 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 OR8J3Q8NGG0 315 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 MAGED4Q96JG8 741 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 SOX17Q9H6I2 414 aaPredicted RBP22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 PRPF19Q9UMS4 504 aaKnown RBP22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 L3MBTL1Q9Y468 752 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 WDFY3Q8IZQ1 3526 aa22.53■■□□□ 1.2
ATPAF1-213ENST00000574428 C15orf38-AP3S2A0A0A6YYH1 394 aa22.52■■□□□ 1.2
ATPAF1-213ENST00000574428 RNF103-CHMP3A0A140T963 221 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms