RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 PRRC2AP48634 2157 aaKnown RBP3.45□□□□□ -1.86
CDC27-216ENST00000574304 FGD5Q6ZNL6 1462 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 SAP18O00422 153 aaKnown RBP3.44□□□□□ -1.86
CDC27-216ENST00000574304 TSC22D2O75157 780 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 CT45A8P0DMV1 189 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 CT45A9P0DMV2 189 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 KCNK10P57789 538 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 ASIC1P78348 528 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 YWHAHQ04917 246 aaPredicted RBP3.44□□□□□ -1.86
CDC27-216ENST00000574304 PPP1R3AQ16821 1122 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 TTC31Q49AM3 519 aaPredicted RBP3.44□□□□□ -1.86
CDC27-216ENST00000574304 CT45A2Q5DJT8 189 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 HECTD3Q5T447 861 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 SYCP3Q8IZU3 236 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 FBXO25Q8TCJ0 367 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 HAS2Q92819 552 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 SIGLEC12Q96PQ1 595 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 DEFB126Q9BYW3 111 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 COPS7BQ9H9Q2 264 aaPredicted RBP3.44□□□□□ -1.86
CDC27-216ENST00000574304 SLC25A19Q9HC21 320 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 ABCB8Q9NUT2 735 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 SEC14L4Q9UDX3 406 aa3.44□□□□□ -1.86
CDC27-216ENST00000574304 MEI4A8MW99 385 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 H0Y626 953 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 STBD1O95210 358 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 CHRNGP07510 517 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 MMP10P09238 476 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 TPBGLP0DKB5 382 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 B4GALT1P15291 398 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 ZNF19P17023 458 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 TNFRSF4P43489 277 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 FNTAP49354 379 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 STXBP2Q15833 593 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 DDI2Q5TDH0 399 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 ARMC3Q5W041 872 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 KCTD11Q693B1 232 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 CD164L2Q6UWJ8 174 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 SLC34A3Q8N130 599 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 PARP8Q8N3A8 854 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 ZNF671Q8TAW3 534 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 EPSTI1Q96J88 318 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 SPAG8Q99932 426 aaPredicted RBP3.43□□□□□ -1.86
CDC27-216ENST00000574304 NTMT1Q9BV86 223 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 ST6GALNAC5Q9BVH7 336 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 TEX13BQ9BXU2 312 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 Q9HAA7 133 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 ZNF275Q9NSD4 429 aaPredicted RBP3.43□□□□□ -1.86
CDC27-216ENST00000574304 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
CDC27-216ENST00000574304 MRTO4Q9UKD2 239 aaKnown RBP3.43□□□□□ -1.86
CDC27-216ENST00000574304 A0A0A6YYC8 382 aaPredicted RBP3.42□□□□□ -1.86
CDC27-216ENST00000574304 SLC15A5A6NIM6 579 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 I3L1I5 382 aaPredicted RBP3.42□□□□□ -1.86
CDC27-216ENST00000574304 GLULP15104 373 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 TCF7P36402 384 aaPredicted RBP3.42□□□□□ -1.86
CDC27-216ENST00000574304 MEOX2P50222 304 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 MFAP2P55001 183 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 ZNF79Q15937 498 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 STX1AQ16623 288 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 GSG1Q2KHT4 349 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 FAM219BQ5XKK7 198 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 C11orf88Q6PI97 169 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 ZNF525Q8N782 197 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 RELL2Q8NC24 303 aaPredicted RBP3.42□□□□□ -1.86
CDC27-216ENST00000574304 FIBINQ8TAL6 211 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 VN1R17PQ8TDU5 208 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 UBTD2Q8WUN7 234 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 FAM46BQ96A09 425 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 CXorf58Q96LI9 332 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 RNF41Q9H4P4 317 aaPredicted RBP3.42□□□□□ -1.86
CDC27-216ENST00000574304 CNIH4Q9P003 139 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 SENP1Q9P0U3 644 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 NYAP2Q9P242 653 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 LIPT1Q9Y234 373 aa3.42□□□□□ -1.86
CDC27-216ENST00000574304 IGHV3OR16-12A0A075B7B8 117 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 KLF18A0A0U1RQI7 1052 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 TSPAN2O60636 221 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 TXNDC12O95881 172 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 GOT2P00505 430 aaKnown RBP3.41□□□□□ -1.86
CDC27-216ENST00000574304 SBK2P0C263 348 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 MBL2P11226 248 aaPredicted RBP3.41□□□□□ -1.86
CDC27-216ENST00000574304 GDF1P27539 372 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 STIP1P31948 543 aaKnown RBP3.41□□□□□ -1.86
CDC27-216ENST00000574304 MDH2P40926 338 aaKnown RBP3.41□□□□□ -1.86
CDC27-216ENST00000574304 SERPINH1P50454 418 aaKnown RBP3.41□□□□□ -1.86
CDC27-216ENST00000574304 ARHGDIAP52565 204 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 SLC25A1P53007 311 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 SLC12A3P55017 1021 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 ROR1Q01973 937 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 PAX2Q02962 417 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 ACER2Q5QJU3 275 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 RHBDD2Q6NTF9 364 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 VASH2Q86V25 355 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 OR6M1Q8NGM8 313 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 OR4L1Q8NH43 312 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 CRYGNQ8WXF5 182 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 RAB3CQ96E17 227 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 CAPNS2Q96L46 248 aa3.41□□□□□ -1.86
CDC27-216ENST00000574304 DDX50Q9BQ39 737 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms