RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 KIAA1161Q6NSJ0 714 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 CCDC137Q6PK04 289 aaKnown RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 UNQ6126/PRO20091Q6UXV3 157 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 IL17RELQ6ZVW7 336 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 TUBA1AQ71U36 451 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 TRMT1LQ7Z2T5 733 aaKnown RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 ARMC9Q7Z3E5 817 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 SLC47A2Q86VL8 602 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 SLC13A5Q86YT5 568 aaPredicted RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 SIAH3Q8IW03 269 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 ZNF619Q8N2I2 560 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 OTUD6BQ8N6M0 293 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 MAPKAPK5-AS1Q8N8E1 139 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 BBOF1Q8ND07 529 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 OR10Q1Q8NGQ4 319 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 ZNF473Q8WTR7 871 aaKnown RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 TCP11Q8WWU5 503 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 C5orf30Q96GV9 206 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 CDKN2AIPNLQ96HQ2 116 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 ZNF479Q96JC4 524 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 PCDHB18PQ96TA0 734 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 NDNQ99608 321 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 TUBA1CQ9BQE3 449 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 ATG101Q9BSB4 218 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 TRIM51Q9BSJ1 452 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 TMEM204Q9BSN7 226 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 URM1Q9BTM9 101 aaKnown RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 PORCNQ9H237 461 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 P2RY12Q9H244 342 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 AKIRIN1Q9H9L7 192 aaPredicted RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 RNPEPL1Q9HAU8 725 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 ZNF302Q9NR11 478 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 DNAJC11Q9NVH1 559 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 SPHK1Q9NYA1 384 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 RBAKQ9NYW8 714 aaPredicted RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 FETUBQ9UGM5 382 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 PCYOX1Q9UHG3 505 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 ZDHHC2Q9UIJ5 367 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 GGA2Q9UJY4 613 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 APPL1Q9UKG1 709 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 GPR132Q9UNW8 380 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 RUVBL2Q9Y230 463 aaKnown RBP3.39□□□□□ -1.87
UBR1-211ENST00000569971 ITM2BQ9Y287 266 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 RIPK3Q9Y572 518 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 KLK4Q9Y5K2 254 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 MYH11P35749 1972 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 PHIPQ8WWQ0 1821 aa3.39□□□□□ -1.87
UBR1-211ENST00000569971 KIAA1217Q5T5P2 1943 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ARID2Q68CP9 1835 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 SMCHD1A6NHR9 2005 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 IGLV5-45A0A087WSX0 123 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 A0A087WUV0 522 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 ILVBLA1L0T0 632 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 GMNCA6NCL1 334 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 TMEM150CB9EJG8 249 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CCL24O00175 119 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 RGS16O15492 202 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 CLDN3O15551 220 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 RAD51DO75771 328 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 BCAS2O75934 225 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 PROSCO94903 275 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 GLCEO94923 617 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 STBD1O95210 358 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PAPSS2O95340 614 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 PIGNO95427 931 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PPP1R3DO95685 299 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 LSM8O95777 96 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 AGTP01019 485 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 IGHV4-39P01824 125 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PIGRP01833 764 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 HLA-DRAP01903 254 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 ALPLP05186 524 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CALB1P05937 261 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 NGFRP08138 427 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 NUDT17P0C025 328 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 SBK2P0C263 348 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CA4P22748 312 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PIK3R1P27986 724 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 SSTR1P30872 391 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 COILP38432 576 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 SSR1P43307 286 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 OR3A1P47881 315 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 PLTPP55058 493 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 YWHAEP62258 255 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 ARF5P84085 180 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 IL1RL1Q01638 556 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CACNG1Q06432 222 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 CUL2Q13617 745 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 TFDP1Q14186 410 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 MXD4Q14582 209 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 PPA1Q15181 289 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 TRADDQ15628 312 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 UAP1Q16222 522 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 PHKG1Q16816 387 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 TTC31Q49AM3 519 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 TTC19Q6DKK2 380 aaPredicted RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 SLC39A4Q6P5W5 647 aa3.38□□□□□ -1.87
UBR1-211ENST00000569971 TRMT10CQ7L0Y3 403 aaKnown RBP3.38□□□□□ -1.87
UBR1-211ENST00000569971 C16orf82Q7Z2V1 217 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms