RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 FBXW8Q8N3Y1 598 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 ARHGEF39Q8N4T4 335 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 DNAAF3Q8N9W5 541 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 LMNTD1Q8N9Z9 388 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 TRPC4APQ8TEL6 797 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 SSC4DQ8WTU2 575 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 PEX13Q92968 403 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00556-201ENST00000569603 LRRC39Q96DD0 335 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 SNRNP40Q96DI7 357 aaKnown RBP5.83□□□□□ -1.48
LINC00556-201ENST00000569603 TSPAN17Q96FV3 270 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 CCDC77Q9BR77 488 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 MESP1Q9BRJ9 268 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 TMEM121Q9BTD3 319 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 MCMBPQ9BTE3 642 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 CD244Q9BZW8 370 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 SLC26A1Q9H2B4 701 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 SYNPO2LQ9H987 977 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 KCNK13Q9HB14 408 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 SNX15Q9NRS6 342 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 TREX1Q9NSU2 369 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 CCM2LQ9NUG4 571 aaPredicted RBP5.83□□□□□ -1.48
LINC00556-201ENST00000569603 P4HTMQ9NXG6 502 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 GPR83Q9NYM4 423 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 SERTAD3Q9UJW9 196 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 NPFFR2Q9Y5X5 522 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
LINC00556-201ENST00000569603 ACANP16112 2415 aa5.83□□□□□ -1.48
LINC00556-201ENST00000569603 NCOA6Q14686 2063 aaPredicted RBP5.83□□□□□ -1.48
LINC00556-201ENST00000569603 A0A1W2PPV9 198 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 A0A1W2PRV1 198 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 A4D1N5 150 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 VSTM2BA6NLU5 285 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ERI2A8K979 691 aaKnown RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 PTGES3LE9PB15 166 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 E9PBE3 544 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SOCS6O14544 535 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ZNF185O15231 689 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CD3EAPO15446 510 aaKnown RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KRT86O43790 486 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 NRP2O60462 931 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CYTIPO60759 359 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CTSVO60911 334 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 VPS4BO75351 444 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CRTAPO75718 401 aaPredicted RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 OR2B3O76000 313 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KLHL2O95198 593 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 OR5F1O95221 314 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 FGF4P08620 206 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 HBQ1P09105 142 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CSF1P09603 554 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 TNFRSF1AP19438 455 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 MSNP26038 577 aaKnown RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 AOAHP28039 575 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CYLC1P35663 651 aaPredicted RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 NUP62P37198 522 aaPredicted RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 RAB28P51157 221 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 RRADP55042 308 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 TRA2BP62995 288 aaKnown RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 DCDP81605 110 aaKnown RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ALDH6A1Q02252 535 aaKnown RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 PLOD1Q02809 727 aaPredicted RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 TAP2Q03519 686 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 Q0VFX4 171 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KIR2DS3Q14952 304 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SPA17Q15506 151 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SNCBQ16143 134 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 P3H1Q32P28 736 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KCTD21Q4G0X4 260 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 NKAIN1Q4KMZ8 207 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ZRANB3Q5FWF4 1079 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 TSTD2Q5T7W7 516 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 FHL5Q5TD97 284 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KLHL24Q6TFL4 600 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KIRREL2Q6UWL6 708 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 NCCRP1Q6ZVX7 275 aaPredicted RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 RAB43Q86YS6 212 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SLC22A9Q8IVM8 553 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 PHC2Q8IXK0 858 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 CMIPQ8IY22 773 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 GALNT16Q8N428 558 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 RNF152Q8N8N0 203 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 HMGCLL1Q8TB92 370 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SLC22A8Q8TCC7 542 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ATG4AQ8WYN0 398 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ELMO1Q92556 727 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 HDAC10Q969S8 669 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 FKBP10Q96AY3 582 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 PTERQ96BW5 349 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 IP6K3Q96PC2 410 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 RAB3IPQ96QF0 476 aaPredicted RBP5.82□□□□□ -1.48
LINC00556-201ENST00000569603 MNTQ99583 582 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 P2RY12Q9H244 342 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 OPA3Q9H6K4 179 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 WDR54Q9H977 334 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SAYSD1Q9NPB0 183 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 ASF1BQ9NVP2 202 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 EURLQ9NYK6 297 aa5.82□□□□□ -1.48
LINC00556-201ENST00000569603 SMARCAL1Q9NZC9 954 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms