RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RIT1Q92963 219 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 TEX37Q96LM6 180 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 SLC25A23Q9BV35 468 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 NMUR2Q9GZQ4 415 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.95■■□□□ 1.1
RAB40C-212ENST00000569575 CCDC167Q9P0B6 97 aa21.95■■□□□ 1.1
RAB40C-212ENST00000569575 A0A1W2PP18 115 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 A0A1W2PRB8 838 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 PLOD2O00469 737 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 ATXN8OSP0DMR3 200 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 TNNI3P19429 210 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 IL12AP29459 219 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 KLF10Q13118 480 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 SFT2D3Q587I9 215 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 COQ5Q5HYK3 327 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 SPANXN4Q5MJ08 99 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 KIRREL2Q6UWL6 708 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 PPP1R32Q7Z5V6 425 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 PROSER1Q86XN7 944 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 OR4N5Q8IXE1 308 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 KDF1Q8NAX2 398 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-212ENST00000569575 RP9Q8TA86 221 aaKnown RBP21.94■■□□□ 1.1
RAB40C-212ENST00000569575 TSLPQ969D9 159 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 UCN3Q969E3 161 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 SPDL1Q96EA4 605 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 FER1L6-AS2Q96M78 137 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 AMDHD1Q96NU7 426 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 OR52E6Q96RD3 313 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 CXorf21Q9HAI6 301 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 C5AR2Q9P296 337 aa21.94■■□□□ 1.1
RAB40C-212ENST00000569575 A0A087WV48 116 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 A0A087WV62 115 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 IGHV1-45A0A0A0MS14 117 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 CCDC154A6NI56 674 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 WASHC1A8K0Z3 465 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 BBIP1A8MTZ0 92 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 TGFBR3LH3BV60 316 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SOCS6O14544 535 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 HPP00738 406 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SNRPB2P08579 225 aaKnown RBP21.93■■□□□ 1.1
RAB40C-212ENST00000569575 PRDX6P30041 224 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 FEN1P39748 380 aaKnown RBP21.93■■□□□ 1.1
RAB40C-212ENST00000569575 NCBP2P52298 156 aaKnown RBP eCLIP21.93■■□□□ 1.1
RAB40C-212ENST00000569575 RRADP55042 308 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 NME5P56597 212 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 RPS18P62269 152 aaKnown RBP21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SF3A3Q12874 501 aaKnown RBP eCLIP21.93■■□□□ 1.1
RAB40C-212ENST00000569575 STX5Q13190 355 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 FUNDC1Q8IVP5 155 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SPACA3Q8IXA5 215 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 GALNT12Q8IXK2 581 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 CCDC116Q8IYX3 515 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SHISA5Q8N114 240 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 TMEM102Q8N9M5 508 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-212ENST00000569575 OR7G1Q8NGA0 311 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 OR11G2Q8NGC1 345 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SUN3Q8TAQ9 357 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 MOAP1Q96BY2 351 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 CTHRC1Q96CG8 243 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 CCDC115Q96NT0 180 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 PTGFRNQ9P2B2 879 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 NCOR2Q9Y618 2525 aa21.93■■□□□ 1.1
RAB40C-212ENST00000569575 SAGE2PA6NJ88 616 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 PLOD3O60568 738 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 SCN2BO60939 215 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 SOX30O94993 753 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 NPPAP01160 153 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 OTX2P32243 289 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 ZFP36L2P47974 494 aaKnown RBP21.92■■□□□ 1.1
RAB40C-212ENST00000569575 TRPC1P48995 793 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 EFNA3P52797 238 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 MAPKAPK3Q16644 382 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 MPEG1Q2M385 716 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 PRICKLE4Q2TBC4 344 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 ZNF385BQ569K4 471 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 OR4F3Q6IEY1 312 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 BHLHB9Q6PI77 547 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 RIPOR1Q6ZS17 1223 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 MRGPREQ86SM8 312 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 VASH2Q86V25 355 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 TRIML2Q8N7C3 387 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 OR9I1Q8NGQ6 314 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 GOT1L1Q8NHS2 421 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-212ENST00000569575 PTPMT1Q8WUK0 201 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-212ENST00000569575 CMTM5Q96DZ9 223 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 FBXL20Q96IG2 436 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 ITCHQ96J02 903 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 CCDC106Q9BWC9 280 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 GLIPR2Q9H4G4 154 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 PNO1Q9NRX1 252 aaKnown RBP21.92■■□□□ 1.1
RAB40C-212ENST00000569575 P4HTMQ9NXG6 502 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 TAS2R9Q9NYW1 312 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 CFL2Q9Y281 166 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 NDUFAF1Q9Y375 327 aa21.92■■□□□ 1.1
RAB40C-212ENST00000569575 APC2O95996 2303 aa21.91■■□□□ 1.1
RAB40C-212ENST00000569575 URB1O60287 2271 aaKnown RBP21.91■■□□□ 1.1
RAB40C-212ENST00000569575 CEP295Q9C0D2 2601 aa21.91■■□□□ 1.1
RAB40C-212ENST00000569575 NSG1A0A0A6YYJ2 146 aa21.91■■□□□ 1.1
RAB40C-212ENST00000569575 OR2W5A6NFC9 320 aa21.91■■□□□ 1.1
RAB40C-212ENST00000569575 C1QTNF9BB2RNN3 333 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms