RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MED12LQ86YW9 2145 aa13.58□□□□□ -0.23
USB1-214ENST00000568848 ROS1P08922 2347 aa13.58□□□□□ -0.23
USB1-214ENST00000568848 A0A088AWK7 358 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 INAFM1C9JVW0 142 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 CCNT2O60583 730 aaKnown RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 ZNF10P21506 573 aaPredicted RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 HIST1H1TP22492 207 aaPredicted RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 TCEA1P23193 301 aaKnown RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 IVDP26440 423 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 KCNC1P48547 511 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 IGLV3-21P80748 117 aaPredicted RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 CDKL1Q00532 357 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 SLAMF1Q13291 335 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 SERTAD2Q14140 314 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 EBPQ15125 230 aaKnown RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 NNATQ16517 81 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 LACC1Q8IV20 430 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 GCNT2Q8N0V5 402 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 LRRN4CLQ8ND94 238 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 WDYHV1Q96HA8 205 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 ZNF597Q96LX8 424 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 Q96MF0 132 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 KCNC2Q96PR1 638 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 TEX10Q9NXF1 929 aaPredicted RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 GALNT8Q9NY28 637 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 SNX12Q9UMY4 172 aa13.58□□□□□ -0.24
USB1-214ENST00000568848 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
USB1-214ENST00000568848 HIVEP2P31629 2446 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 FAM47E-STBD1D6RA91 191 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 WISP3O95389 354 aaPredicted RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 TTC4O95801 387 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 IL2RAP01589 272 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 C1QAP02745 245 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 CT62P0C5K7 136 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 NID1P14543 1247 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 HNMTP50135 292 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 CDK9P50750 372 aaKnown RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 NAGLUP54802 743 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 SLC37A1P57057 533 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 SRYQ05066 204 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 STEAP4Q687X5 459 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 GALNT7Q86SF2 657 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 ADAMTSL2Q86TH1 951 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 NKAPQ8N5F7 415 aaKnown RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 RDH11Q8TC12 318 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 PTCD3Q96EY7 689 aaKnown RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 FBXL20Q96IG2 436 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 KRT12Q99456 494 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 NAP1L3Q99457 506 aaPredicted RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 PRDM14Q9GZV8 571 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 UBQLN3Q9H347 655 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 RPF2Q9H7B2 306 aaKnown RBP13.57□□□□□ -0.24
USB1-214ENST00000568848 TEX264Q9Y6I9 313 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 CUBNO60494 3623 aa13.57□□□□□ -0.24
USB1-214ENST00000568848 C17orf51A8MQB3 221 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 CXorf49A8MYA2 514 aaPredicted RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 AHRRA9YTQ3 701 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 TMPRSS11DO60235 418 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 EEDO75530 441 aaKnown RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 GBAP04062 536 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 COX7A2P14406 83 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 CTSSP25774 331 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 TIMP3P35625 211 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 RPL21P46778 160 aaKnown RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 MRPS25P82663 173 aaKnown RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 TNFRSF17Q02223 184 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 IRF8Q02556 426 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 NTRK2Q16620 822 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 PDK4Q16654 411 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 AP5B1Q2VPB7 878 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 VASNQ6EMK4 673 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 RNF111Q6ZNA4 994 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 BBOF1Q8ND07 529 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 SIMC1Q8NDZ2 872 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 GABPB2Q8TAK5 448 aaPredicted RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 ZNF592Q92610 1267 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 PERPQ96FX8 193 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 VPS39Q96JC1 886 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 COX4I2Q96KJ9 171 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 TUBA1CQ9BQE3 449 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 GPRC5BQ9NZH0 403 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 EHD3Q9NZN3 535 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 CD274Q9NZQ7 290 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 JKAMPQ9P055 326 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 ZNF629Q9UEG4 869 aaPredicted RBP13.56□□□□□ -0.24
USB1-214ENST00000568848 PYCARDQ9ULZ3 195 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 DTX4Q9Y2E6 619 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
USB1-214ENST00000568848 SH3D21A4FU49 640 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 LRRC14BA6NHZ5 514 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms