RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 GPR180Q86V85 440 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 TNIP2Q8NFZ5 429 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 HUS1BQ8NHY5 278 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 UBTD2Q8WUN7 234 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 UCN3Q969E3 161 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 RMND5BQ96G75 393 aaPredicted RBP14.26□□□□□ -0.13
NME3-211ENST00000568561 ART5Q96L15 291 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 SH3GL2Q99962 352 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 DOHHQ9BU89 302 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 DMRT3Q9NQL9 472 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 RASSF1Q9NS23 344 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 B4GALT7Q9UBV7 327 aa14.26□□□□□ -0.13
NME3-211ENST00000568561 IQANK1A0A1B0GTG1 560 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 LRRC14BA6NHZ5 514 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 FAM159BA6NKW6 160 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 CCDC188H7C350 402 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 K7EPI3 171 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 TMPRSS11DO60235 418 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 OR10H2O60403 315 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 EEDO75530 441 aaKnown RBP14.25□□□□□ -0.13
NME3-211ENST00000568561 GPX6P59796 221 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 RPS13P62277 151 aaKnown RBP14.25□□□□□ -0.13
NME3-211ENST00000568561 DUSP8Q13202 625 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 KRTAP21-3Q3LHN1 58 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 ACSF3Q4G176 576 aaPredicted RBP14.25□□□□□ -0.13
NME3-211ENST00000568561 RAPH1Q70E73 1250 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 ISCA2Q86U28 154 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 CDC20BQ86Y33 519 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 ST13P4Q8IZP2 240 aaPredicted RBP14.25□□□□□ -0.13
NME3-211ENST00000568561 TEX9Q8N6V9 391 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 PPM1NQ8N819 430 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 CHDHQ8NE62 594 aaPredicted RBP14.25□□□□□ -0.13
NME3-211ENST00000568561 STAG3L4Q8TBR4 150 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 TANKQ92844 425 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 NINJ1Q92982 152 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 RGMAQ96B86 450 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 ATOH8Q96SQ7 321 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 ZNF717Q9BY31 904 aaPredicted RBP14.25□□□□□ -0.13
NME3-211ENST00000568561 IGSF5Q9NSI5 407 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 PHF11Q9UIL8 331 aa14.25□□□□□ -0.13
NME3-211ENST00000568561 HSPB2A8KAH6 182 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 FAM47E-STBD1D6RA91 191 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 PROM1O43490 865 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 KERAO60938 352 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 GPR75O95800 540 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 NR2F6P10588 404 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 HOXB4P17483 251 aaPredicted RBP14.24□□□□□ -0.13
NME3-211ENST00000568561 SERPINB3P29508 390 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 SERPINB1P30740 379 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 SSTR4P31391 388 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 ASCL1P50553 236 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 SLC37A1P57057 533 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 FBXW4P57775 412 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 GNG11P61952 73 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 PPP2R2AP63151 447 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 CRYZQ08257 329 aaKnown RBP14.24□□□□□ -0.13
NME3-211ENST00000568561 FOXD4Q12950 439 aaPredicted RBP14.24□□□□□ -0.13
NME3-211ENST00000568561 HSPB2Q16082 182 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 KBTBD12Q3ZCT8 623 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 FLYWCH1Q4VC44 716 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 ZCCHC7Q8N3Z6 543 aaKnown RBP14.24□□□□□ -0.13
NME3-211ENST00000568561 SLC15A4Q8N697 577 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 DIO2Q92813 273 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 RIT1Q92963 219 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 ZNF597Q96LX8 424 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 ACKR4Q9NPB9 350 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.24□□□□□ -0.132e-11■■■■■ 42.6
NME3-211ENST00000568561 MS4A12Q9NXJ0 267 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 CNIH4Q9P003 139 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 CBLCQ9ULV8 474 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 SLC6A5Q9Y345 797 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 SAR1BQ9Y6B6 198 aa14.24□□□□□ -0.13
NME3-211ENST00000568561 A0A1W2PR48 441 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 A6NNC1 897 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 SYT5O00445 386 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 DVL2O14641 736 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 TRIM3O75382 744 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 TRAPPC6AO75865 159 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 AIFM1O95831 613 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 GBAP04062 536 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 EPB42P16452 691 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 TACR1P25103 407 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 TLX1P31314 330 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 SPRP35270 261 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 BUD31P41223 144 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 PIK3CGP48736 1102 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 AGFG1P52594 562 aaKnown RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 IRF9Q00978 393 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 CALCOCO2Q13137 446 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 NTRK2Q16620 822 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 SPRED3Q2MJR0 410 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 DCST1Q5T197 706 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 C3orf62Q6ZUJ4 267 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 TBC1D1Q86TI0 1168 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 PRR22Q8IZ63 422 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 KCTD4Q8WVF5 259 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 NXNL1Q96CM4 212 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
NME3-211ENST00000568561 CENPKQ9BS16 269 aa14.23□□□□□ -0.13
NME3-211ENST00000568561 GSX1Q9H4S2 264 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms