RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CLPSP04118 112 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 HRGP04196 525 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 TIMP3P35625 211 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 GGT5P36269 586 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 HNRNPH2P55795 449 aaKnown RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 PLIN5Q00G26 463 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 IRF8Q02556 426 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 MGAT5Q09328 741 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 SLAMF1Q13291 335 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 EBPQ15125 230 aaKnown RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 AP5B1Q2VPB7 878 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 PLXDC2Q6UX71 529 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 RNF111Q6ZNA4 994 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 SLC29A4Q7RTT9 530 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 PRIMA1Q86XR5 153 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 GPSM1Q86YR5 675 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 PDIK1LQ8N165 341 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 SLC15A4Q8N697 577 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 C9orf106Q8NAJ2 232 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 ARSGQ96EG1 525 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 KRT12Q99456 494 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 MDFIQ99750 246 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 YIPF4Q9BSR8 244 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 DERL2Q9GZP9 239 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 RPF2Q9H7B2 306 aaKnown RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 ZNF395Q9H8N7 513 aaPredicted RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 NEUROD4Q9HD90 331 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 SMYD2Q9NRG4 433 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 ZNF629Q9UEG4 869 aaPredicted RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 MTO1Q9Y2Z2 717 aaKnown RBP14.18□□□□□ -0.14
PALB2-205ENST00000567003 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
PALB2-205ENST00000567003 GOLGA6L10A0A0M3HER8 536 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 A0A1W2PS29 197 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 SCELO95171 688 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 LY6G6DO95868 133 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 ALOX15P16050 662 aaPredicted RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 SERPINB3P29508 390 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 SOX18P35713 384 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 CDK9P50750 372 aaKnown RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 NKX6-1P78426 367 aaPredicted RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 TNFRSF17Q02223 184 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 DDX39BQ13838 428 aaKnown RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 NTRK2Q16620 822 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 EIPR1Q53HC9 387 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 FNDC7Q5VTL7 733 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 NSUN5P2Q63ZY6 315 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 CAPN12Q6ZSI9 719 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 CIARTQ8N365 385 aaPredicted RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 TCAIMQ8N3R3 496 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 ACTRT1Q8TDG2 376 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 UCN3Q969E3 161 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 HSPBAP1Q96EW2 488 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 RBM18Q96H35 190 aaKnown RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 RILPQ96NA2 401 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 GNRHR2Q96P88 292 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 OSBPL9Q96SU4 736 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 UGT2B28Q9BY64 529 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 PRDM14Q9GZV8 571 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 CNOT10Q9H9A5 744 aaKnown RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 CD274Q9NZQ7 290 aa14.17□□□□□ -0.14
PALB2-205ENST00000567003 FOXD3Q9UJU5 478 aaPredicted RBP14.17□□□□□ -0.14
PALB2-205ENST00000567003 IQANK1A0A1B0GTG1 560 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 GLOD5A6NK44 160 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 DYRK3O43781 588 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 HEXAP06865 529 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 CCDC166P0CW27 439 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 CD1DP15813 335 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 BMP7P18075 431 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 CTSSP25774 331 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 SLC37A1P57057 533 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 TBL3Q12788 808 aaKnown RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 FOXF2Q12947 444 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 LAPTM5Q13571 262 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 TOMM20Q15388 145 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 PAGE2BQ5JRK9 111 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 WIPI1Q5MNZ9 446 aaPredicted RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 KHDRBS2Q5VWX1 349 aaKnown RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 VASNQ6EMK4 673 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 OR4C11Q6IEV9 310 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 SULT1C3Q6IMI6 304 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 CXorf67Q86X51 503 aaPredicted RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 KIF18BQ86Y91 864 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 PRR22Q8IZ63 422 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 FBXO36Q8NEA4 188 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 SRFBP1Q8NEF9 429 aaKnown RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 WDYHV1Q96HA8 205 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 ART5Q96L15 291 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 MCMBPQ9BTE3 642 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 UBQLN3Q9H347 655 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 RHOJQ9H4E5 214 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 PTBP2Q9UKA9 531 aaKnown RBP14.16□□□□□ -0.14
PALB2-205ENST00000567003 C15orf41Q9Y2V0 281 aa14.16□□□□□ -0.14
PALB2-205ENST00000567003 MBD3L4A6NDZ8 208 aaPredicted RBP14.15□□□□□ -0.14
PALB2-205ENST00000567003 MBD3L3A6NE82 208 aaPredicted RBP14.15□□□□□ -0.14
PALB2-205ENST00000567003 MBD3L5A6NJ08 208 aaPredicted RBP14.15□□□□□ -0.14
PALB2-205ENST00000567003 GNB5O14775 395 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms