RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ALDH6A1Q02252 535 aaKnown RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 TSTA3Q13630 321 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 MLC1Q15049 377 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 MED22Q15528 200 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 TSTQ16762 297 aaKnown RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 IER5LQ5T953 404 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 KHDRBS2Q5VWX1 349 aaKnown RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 ZNF547Q8IVP9 402 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 WDR36Q8NI36 951 aaKnown RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 SLC38A5Q8WUX1 472 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 KLHL6Q8WZ60 621 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 OR5M11Q96RB7 305 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 OR52A5Q9H2C5 316 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 ITM2BQ9Y287 266 aa15.9■□□□□ 0.14
CMTM3-213ENST00000566756 LSM2Q9Y333 95 aaKnown RBP15.9■□□□□ 0.14
CMTM3-213ENST00000566756 TMEM265A0A087WTH1 108 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 HTR3EA5X5Y0 456 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 PLPP1O14494 284 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 SNPHO15079 494 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 CAPN5O15484 640 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 PDPK1O15530 556 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 COQ9O75208 318 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 HSMCR30P0CW71 290 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 CNTN1Q12860 1018 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 OCLNQ16625 522 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 DCST1Q5T197 706 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 AKAP14Q86UN6 197 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 PDZD3Q86UT5 571 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 MMAAQ8IVH4 418 aaKnown RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 DCUN1D3Q8IWE4 304 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 LINC00471Q8N535 108 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 HORMAD2Q8N7B1 307 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 SETD6Q8TBK2 473 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ZNF354BQ96LW1 612 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 MS4A8Q9BY19 250 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ZNF717Q9BY31 904 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 NUAK2Q9H093 628 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 PCBD2Q9H0N5 130 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 WASH6PQ9NQA3 447 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 NPAP1Q9NZP6 1156 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 TRBV4-1A0A0J9YWV2 114 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 KCNK2O95069 426 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 DLGAP3O95886 979 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ELAVL4P26378 380 aaKnown RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 KCNJ5P48544 419 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 MAPK12P53778 367 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 PCBP4P57723 403 aaKnown RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 MEF2AQ02078 507 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 SSX1Q16384 188 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 CYP27C1Q4G0S4 372 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 SLC25A30Q5SVS4 291 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 TCTN3Q6NUS6 607 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 CD300LDQ6UXZ3 194 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ZNF740Q8NDX6 193 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 FAM83FQ8NEG4 500 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 GPR32P1Q8NGA4 272 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 OR8J1Q8NGP2 316 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 HTRA1Q92743 480 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 TM4SF18Q96CE8 201 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 TMEM80Q96HE8 168 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 TMEM19Q96HH6 336 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 OPALINQ96PE5 141 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ZNF607Q96SK3 696 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 AIF1LQ9BQI0 150 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 FUZQ9BT04 418 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 RSPH9Q9H1X1 276 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 TRPV5Q9NQA5 729 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ACSS1Q9NUB1 689 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 QPCTLQ9NXS2 382 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 SEC14L4Q9UDX3 406 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 ADAM29Q9UKF5 820 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 SLC6A14Q9UN76 642 aa15.89■□□□□ 0.13
CMTM3-213ENST00000566756 RPL36Q9Y3U8 105 aaKnown RBP15.89■□□□□ 0.13
CMTM3-213ENST00000566756 COL4A2P08572 1712 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 ANKDD1BA6NHY2 528 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 PDZK1P1A8MUH7 402 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 APOA1P02647 267 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 RPN2P04844 631 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 BCHEP06276 602 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 H1F0P07305 194 aaKnown RBP15.88■□□□□ 0.13
CMTM3-213ENST00000566756 BSGP35613 385 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 KIR2DL1P43626 348 aaPredicted RBP15.88■□□□□ 0.13
CMTM3-213ENST00000566756 CRISP3P54108 245 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 MANFP55145 182 aaKnown RBP15.88■□□□□ 0.13
CMTM3-213ENST00000566756 TPTEP56180 551 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 CYP4F2P78329 520 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 NDUFA9Q16795 377 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 SOWAHCQ53LP3 525 aaPredicted RBP15.88■□□□□ 0.13
CMTM3-213ENST00000566756 C11orf96Q7Z7L8 435 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 C17orf64Q86WR6 236 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 HEATR4Q86WZ0 1026 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 MND1Q9BWT6 205 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 TMEM121BQ9BXQ6 578 aaPredicted RBP15.88■□□□□ 0.13
CMTM3-213ENST00000566756 RNF167Q9H6Y7 350 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 MOV10Q9HCE1 1003 aaKnown RBP15.88■□□□□ 0.13
CMTM3-213ENST00000566756 SACM1LQ9NTJ5 587 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 ZSCAN32Q9NX65 697 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 SNX8Q9Y5X2 465 aa15.88■□□□□ 0.13
CMTM3-213ENST00000566756 ANTXRLA6NF34 631 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms