RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PIP5K1AQ99755 562 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 URM1Q9BTM9 101 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 A0A096LPI6 279 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 CLCA1A8K7I4 914 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 A8MV72 311 aaPredicted RBP13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 EEF1E1O43324 174 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 AMY2BP19961 511 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 ATP4BP51164 291 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 SRYQ05066 204 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 RBM39Q14498 530 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 FIGNL1Q6PIW4 674 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 ZC3H14Q6PJT7 736 aaKnown RBP13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 ZNF783Q6ZMS7 281 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 LHFPL3Q86UP9 236 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 LIX1LQ8IVB5 337 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 MFSD8Q8NHS3 518 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
CX3CL1-204ENST00000565912 KIF13AQ9H1H9 1805 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 RBMS1P29558 406 aaKnown RBP13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 OTX2P32243 289 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 DHCR24Q15392 516 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 PLEKHN1Q494U1 663 aaPredicted RBP13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 SLC36A3Q495N2 470 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 COQ8AQ8NI60 647 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 SORCS1Q8WY21 1168 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 DOHHQ9BU89 302 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 ZNF442Q9H7R0 627 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 REV1Q9UBZ9 1251 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 C2orf78A6NCI8 922 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 SLITRK5O94991 958 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 CNOT4O95628 575 aaKnown RBP13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 CD1DP15813 335 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 NPR2P20594 1047 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 SPATS1Q496A3 300 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 TMEM151BQ8IW70 566 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 C16orf58Q96GQ5 468 aa13.02□□□□□ -0.32
CX3CL1-204ENST00000565912 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 SNAI1O95863 264 aaPredicted RBP13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 IFNA5P01569 189 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 RPS3P23396 243 aaKnown RBP eCLIP13.02□□□□□ -0.331e-8■■■■□ 20.9
CX3CL1-204ENST00000565912 ACVR1BP36896 505 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 RAB15P59190 212 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 RPS26P62854 115 aaKnown RBP13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 CLCA4Q14CN2 919 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 SFT2D3Q587I9 215 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 XKR5Q6UX68 686 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 ZUFSPQ96AP4 578 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 PITX2Q99697 317 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 TUBA1CQ9BQE3 449 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 NELFAQ9H3P2 528 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 CACNA1FO60840 1977 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 COL1A1P02452 1464 aaPredicted RBP13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 MAGEA3P43357 314 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 MAP2K4P45985 399 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 LRIG1Q96JA1 1093 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 OR2S2Q9NQN1 319 aa13.02□□□□□ -0.33
CX3CL1-204ENST00000565912 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 GRIA2P42262 883 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 GCGRP47871 477 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 RPS15AP62244 130 aaKnown RBP13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 GRB7Q14451 532 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 AADACL4Q5VUY2 407 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ATG9BQ674R7 924 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 MTFR2Q6P444 385 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 DIO2Q92813 273 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 RARRES3Q9UL19 164 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 LIPT1Q9Y234 373 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ZNF175Q9Y473 711 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ZNF451Q9Y4E5 1061 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 IFNGR1P15260 489 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 OXTRP30559 389 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 PYCR1P32322 319 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ZNF81P51508 661 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ACTC1P68032 377 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ACTA1P68133 377 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ZNF367Q7RTV3 350 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 ELMOD2Q8IZ81 293 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 OR5L2Q8NGL0 311 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 SPRYD4Q8WW59 207 aaPredicted RBP13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 RXFP3Q9NSD7 469 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 SUSD2Q9UGT4 822 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 M0R233 179 aa13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 HTRA2O43464 458 aaPredicted RBP13.01□□□□□ -0.33
CX3CL1-204ENST00000565912 P04436 131 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms