RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PRKAR1AP10644 381 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CELP19835 753 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 AGFG1P52594 562 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SRP54P61011 504 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 AP1S1P61966 158 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FCN2Q15485 313 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 WASH2PQ6VEQ5 465 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 CPA6Q8N4T0 437 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 HORMAD2Q8N7B1 307 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 EGLN3Q9H6Z9 239 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ATP13A2Q9NQ11 1180 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 STOX2Q9P2F5 926 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FBXO9Q9UK97 447 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PRMT3O60678 531 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PDE9AO76083 593 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 IL3P08700 152 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 PPIBP23284 216 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ELAVL4P26378 380 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 FLT3LGP49771 235 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 NCF4Q15080 339 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SYTL3Q4VX76 610 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 ZNF770Q6IQ21 691 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 RNF165Q6ZSG1 346 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 BEST4Q8NFU0 473 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GPR32P1Q8NGA4 272 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 BTN2A2Q8WVV5 523 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 MSANTD3Q96H12 275 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SENP5Q96HI0 755 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 GPA33Q99795 319 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 YIPF4Q9BSR8 244 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 SLC6A16Q9GZN6 736 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 KCNK12Q9HB15 430 aa19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 RBFOX1Q9NWB1 397 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-206ENST00000564844 TSPAN6O43657 245 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LANCL1O43813 399 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 AKAP8O43823 692 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MPZL2O60487 215 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ASMTP46597 345 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DSTNP60981 165 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LIPJQ5W064 366 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ANKRD54Q6NXT1 300 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GLRX5Q86SX6 157 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PROKR2Q8NFJ6 384 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR4M2Q8NGB6 313 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLC38A5Q8WUX1 472 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 WDFY2Q96P53 400 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CXorf36Q9H7Y0 433 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 B4GALT6Q9UBX8 382 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR6C75A6NL08 312 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TOXO94900 526 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SERPINA4P29622 427 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CTSCP53634 463 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MLLT11Q13015 90 aaPredicted RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLBPQ14493 270 aaKnown RBP eCLIP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SPOUT1Q5T280 376 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RETSATQ6NUM9 610 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TMEM19Q96HH6 336 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 THSD1Q9NS62 852 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 HCN2Q9UL51 889 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ANGPT4Q9Y264 503 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 HELZP42694 1942 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SYN3O14994 580 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TEX28O15482 410 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ARHGEF15O94989 841 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C1QBP02746 253 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ALPPL2P10696 532 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LIMS1P48059 325 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SRP9P49458 86 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SMSP52788 366 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF791Q3KP31 576 aaPredicted RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PUS10Q3MIT2 529 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CHST9Q7L1S5 443 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MARCH9Q86YJ5 346 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SPERTQ8NA61 448 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR4F15Q8NGB8 312 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LRRC20Q8TCA0 184 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 BCL7CQ8WUZ0 217 aaPredicted RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C1QTNF6Q9BXI9 259 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RC3H2Q9HBD1 1191 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MARCH5Q9NX47 278 aa19.45■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RNASET2O00584 256 aaKnown RBP19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 STATHP02808 62 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CBSLP0DN79 551 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CBSP35520 551 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RRAS2P62070 204 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MAB21L1Q13394 359 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SYT14P1Q58G82 188 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 FAAH2Q6GMR7 532 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C11orf96Q7Z7L8 435 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IQCHQ86VS3 1027 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 BPHLQ86WA6 291 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CHTF18Q8WVB6 975 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DHRS9Q9BPW9 319 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PLA2G12AQ9BZM1 189 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MGAT4AQ9UM21 535 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LOC105369274A0A096LPK9 316 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GFYI3L273 518 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLC30A4O14863 429 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SEPT4O43236 478 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 EPHX1P07099 455 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms