RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 IGKV3-11P04433 115 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 SOX3P41225 446 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 MEOX1P50221 254 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 XKP51811 444 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 TRA2BP62995 288 aaKnown RBP17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 ERCC6LQ2NKX8 1250 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 KRTCAP3Q53RY4 240 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 C6orf163Q5TEZ5 329 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 LIPMQ5VYY2 423 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 OPN5Q6U736 354 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 RNF111Q6ZNA4 994 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 FRMD7Q6ZUT3 714 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 SLC29A4Q7RTT9 530 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 MDGA2Q7Z553 956 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 SULF2Q8IWU5 870 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 CPSF7Q8N684 471 aaKnown RBP17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 NUBPLQ8TB37 319 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 TM4SF18Q96CE8 201 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 PSMG3-AS1Q96PY0 264 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 KCNA7Q96RP8 456 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 PARD6BQ9BYG5 372 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 PSME2Q9UL46 239 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 NPIPA1Q9UND3 350 aa17.01■□□□□ 0.31
SYNGR3-204ENST00000564642 A0A1B0GUH1 482 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 HRKO00198 91 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 UBFD1O14562 309 aaKnown RBP17■□□□□ 0.31
SYNGR3-204ENST00000564642 LRRTM2O43300 516 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 PEX1O43933 1283 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 STSP08842 583 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 CHN1P15882 459 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 ALDH9A1P49189 494 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 HTR6P50406 440 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 PER3P56645 1201 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 BTKQ06187 659 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 ACSM2AQ08AH3 577 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 ASPHQ12797 758 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 MPEG1Q2M385 716 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 SPIN4Q56A73 249 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 PIGGQ5H8A4 983 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 ACSM2BQ68CK6 577 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 SCIMPQ6UWF3 145 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 TRABD2AQ86V40 505 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 C9orf40Q8IXQ3 194 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 SRRM1Q8IYB3 904 aaKnown RBP17■□□□□ 0.31
SYNGR3-204ENST00000564642 POGLUT1Q8NBL1 392 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 SLC22A8Q8TCC7 542 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 APOPT1Q96IL0 206 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 GPR137Q96N19 417 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 ACPTQ9BZG2 426 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 TSPAN10Q9H1Z9 355 aaPredicted RBP17■□□□□ 0.31
SYNGR3-204ENST00000564642 MCM8Q9UJA3 840 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 LRRK2Q5S007 2527 aa17■□□□□ 0.31
SYNGR3-204ENST00000564642 PRRC2CQ9Y520 2896 aaKnown RBP16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 GNG14A0A1W2PPG7 69 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 SERTM1A2A2V5 107 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 OR6C76A6NM76 312 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 PCDH7O60245 1069 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 ERAL1O75616 437 aaKnown RBP16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 LDLRP01130 860 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 CPMP14384 443 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 PORP16435 677 aaPredicted RBP16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 ZNF24P17028 368 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 NT5EP21589 574 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 FOXA1P55317 472 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 GPR85P60893 370 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 HMGCS1Q01581 520 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 IMPG1Q17R60 797 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 SPDYAQ5MJ70 313 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 SLC48A1Q6P1K1 146 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 C10orf107Q8IVU9 208 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 GALNT12Q8IXK2 581 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 BANPQ8N9N5 519 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 PSD4Q8NDX1 1056 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 APIPQ96GX9 242 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 CXorf21Q9HAI6 301 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 MKS1Q9NXB0 559 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 LGALS13Q9UHV8 139 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 PLLPQ9Y342 182 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 CROCCQ5TZA2 2017 aa16.99■□□□□ 0.31
SYNGR3-204ENST00000564642 EML6Q6ZMW3 1958 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 TRGV8A0A0C4DH27 118 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 A0A1W2PS29 197 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 ASNA1O43681 348 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 TRIM13O60858 407 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 WISP2O76076 250 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 CSNK2A2P19784 350 aaPredicted RBP16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 CASP6P55212 293 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 SLC37A1P57057 533 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 ZNF750Q32MQ0 723 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 C1QL3Q5VWW1 255 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 RTL4Q6ZR62 310 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 FJX1Q86VR8 437 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 SLC15A4Q8N697 577 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 KLHL29Q96CT2 875 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 SGCZQ96LD1 299 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 GAL3ST4Q96RP7 486 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 SMC6Q96SB8 1091 aa16.98■□□□□ 0.31
SYNGR3-204ENST00000564642 SHCBP1LQ9BZQ2 653 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms