RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PCCBP05166 539 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 AXLP30530 894 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MTIF2P46199 727 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZFP36L2P47974 494 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 SGSHP51688 502 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CRYBA2P53672 197 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 RPS4XP62701 263 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 SNTB2Q13425 540 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 FHL1Q13642 323 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MTF1Q14872 753 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 FAM76BQ5HYJ3 339 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 FAM72AQ5TYM5 149 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SULT1C3Q6IMI6 304 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 FAM72DQ6L9T8 149 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CWC27Q6UX04 472 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 ASRGL1Q7L266 308 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CHMP1BQ7LBR1 199 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 PTAR1Q7Z6K3 402 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 LHFPL4Q7Z7J7 247 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 LCA5Q86VQ0 697 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 FAM72BQ86X60 149 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 DCUN1D3Q8IWE4 304 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ARFGAP2Q8N6H7 521 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 BANPQ8N9N5 519 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 OR9Q2Q8NGE9 314 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 RPLP0P6Q8NHW5 317 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 WDR36Q8NI36 951 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 LIPHQ8WWY8 451 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SLCO2A1Q92959 643 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZNF486Q96H40 463 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZNF300Q96RE9 604 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 TPPP3Q9BW30 176 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GTSE1Q9NYZ3 720 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TMEM181Q9P2C4 612 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MBD2Q9UBB5 411 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 PLCL2Q9UPR0 1127 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MAB21L2Q9Y586 359 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 IGHV3-20A0A0C4DH32 117 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CLRN2A0PK11 232 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 E2F3O00716 465 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZNF195O14628 629 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ANXA9O76027 345 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TNNI3P19429 210 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 HTR2AP28223 471 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 OTX2P32243 289 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MAP2K2P36507 400 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 PRPHP41219 470 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 PTGFRP43088 359 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 IFNAR2P48551 515 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 RPL27P61353 136 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 KLF5Q13887 457 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 RFTN1Q14699 578 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 SLC17A1Q14916 467 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SGSM1Q2NKQ1 1148 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZNF699Q32M78 642 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 NADK2Q4G0N4 442 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 DCAF12Q5T6F0 453 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 STPG1Q5TH74 334 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 NCR3LG1Q68D85 454 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 NEPROQ6NW34 567 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CBLN3Q6UW01 205 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 Q6ZRP5 223 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CNBD1Q8NA66 436 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MRPL24Q96A35 216 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 GMPPAQ96IJ6 420 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 COG3Q96JB2 828 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 UHRF2Q96PU4 802 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TESK2Q96S53 571 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 KRT12Q99456 494 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MED20Q9H944 212 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ATAD3AQ9NVI7 634 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 AATFQ9NY61 560 aaKnown RBP eCLIP2.2□□□□□ -2.06
CHD9-209ENST00000564255 SLC6A5Q9Y345 797 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ANGPTL3Q9Y5C1 460 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZHX2Q9Y6X8 837 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SYNJ2O15056 1496 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 LOC390937A0A1W2PQ73 354 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 TRIM64CA6NLI5 447 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 MEI4A8MW99 385 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GPR89AB7ZAQ6 455 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 K7EQD1 137 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 LMX1BO60663 402 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 NXPH4O95158 308 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GOT2P00505 430 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 IGLV2-11P01706 119 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 LYNP07948 512 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ASNSP08243 561 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 HMBSP08397 361 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 PATE4P0C8F1 98 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GPR89BP0CG08 455 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GNB3P16520 340 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 DRD5P21918 477 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 HNRNPA2B1P22626 353 aaKnown RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 ACTR1AP61163 376 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 GNB1P62873 340 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 SHROOM1Q2M3G4 852 aaPredicted RBP2.2□□□□□ -2.06
CHD9-209ENST00000564255 CEP55Q53EZ4 464 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 STEAP1BQ6NZ63 245 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 ZNF730Q6ZMV8 503 aa2.2□□□□□ -2.06
CHD9-209ENST00000564255 CUZD1Q86UP6 607 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms