RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SWAP70Q9UH65 585 aa2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 MTF2Q9Y483 593 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P33-201ENST00000563485 ARID1AO14497 2285 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 TRABD2BA6NFA1 517 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLC15A5A6NIM6 579 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 A8MX80 341 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 H0YIG0 161 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 CHUKO15111 745 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 ACTL6AO96019 429 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 IGHV3-9P01782 118 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 KCNJ1P48048 391 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 QRICH1Q2TAL8 776 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 WSCD2Q2TBF2 565 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 TATDN1Q6P1N9 297 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 TIFABQ6ZNK6 161 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 ITIH5Q86UX2 942 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 APOBEC3FQ8IUX4 373 aaKnown RBP2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 AQP12AQ8IXF9 295 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 Q8N9G6 341 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 OR13F1Q8NGS4 319 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 GOLGA5Q8TBA6 731 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 SNRNP27Q8WVK2 155 aaKnown RBP2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 PRCCQ92733 491 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLCO4A1Q96BD0 722 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 FAM122AQ96E09 287 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 TECTBQ96PL2 329 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 SSX3Q99909 188 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 Q9HAA7 133 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 ADGRL4Q9HBW9 690 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 KLHL21Q9UJP4 597 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 ACEP12821 1306 aa2.12□□□□□ -2.07
HMGB1P33-201ENST00000563485 A0A087X0K7 114 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 TRAV34A0A0B4J273 112 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 SH3PXD2BA1X283 911 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 MAGEB16A2A368 324 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 FAM231BA6NCW3 169 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 FIBPO43427 364 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF861PO60384 105 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 MMP10P09238 476 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 MDKP21741 143 aaPredicted RBP2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 BDNFP23560 247 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 IL2RGP31785 369 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 SOAT1P35610 550 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 NUCB1Q02818 461 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 OVGP1Q12889 678 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 ASAH1Q13510 395 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 P2RY14Q15391 338 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 ACKR1Q16570 336 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 CAVIN1Q6NZI2 390 aaKnown RBP2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 OR8H2Q8N162 312 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 RNF138Q8WVD3 245 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 CORO2AQ92828 525 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 FAM104AQ969W3 186 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 ERO1AQ96HE7 468 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 IMMP1LQ96LU5 166 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 EBF4Q9BQW3 602 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 NUSAP1Q9BXS6 441 aaKnown RBP2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 PSORS1C1Q9UIG5 152 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 NACAE9PAV3 2078 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 CHD4Q14839 1912 aa2.11□□□□□ -2.07
HMGB1P33-201ENST00000563485 RSPH10B2B2RC85 870 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 K7ERI5 159 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 GOT2P00505 430 aaKnown RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 HSP90AA1P07900 732 aaKnown RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 GSTA2P09210 222 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 SNRPCP09234 159 aaKnown RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 RSPH10BP0C881 870 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZNF853P0CG23 659 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 GP5P40197 560 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 P2RY4P51582 365 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 OR1C1Q15619 314 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 ZCCHC12Q6PEW1 402 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 APOOLQ6UXV4 268 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 ENTHD1Q8IYW4 607 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 RELL2Q8NC24 303 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 TRPV3Q8NET8 790 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 FBXO25Q8TCJ0 367 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 AFAP1L1Q8TED9 768 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 SETD7Q8WTS6 366 aaKnown RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 UBLCP1Q8WVY7 318 aaPredicted RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 KIR2DL4Q99706 377 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 AGPAT1Q99943 283 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLC25A19Q9HC21 320 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 MIS18AQ9NYP9 233 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 TECRQ9NZ01 308 aaKnown RBP2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 RAI14Q9P0K7 980 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 TNRQ92752 1358 aa2.1□□□□□ -2.07
HMGB1P33-201ENST00000563485 MEGF6O75095 1541 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 PINLYPA6NC86 204 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 MEI4A8MW99 385 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 SLC30A4O14863 429 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 DKC1O60832 514 aaKnown RBP eCLIP2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 IGLV1-47P01700 117 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 HSPB1P04792 205 aaKnown RBP2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 APOA4P06727 396 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 MAGEB1P43366 347 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 TRPC1P48995 793 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 ARHGDIBP52566 201 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 GNB2P62879 340 aa2.09□□□□□ -2.07
HMGB1P33-201ENST00000563485 GABPAQ06546 454 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms