RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 DIO2Q92813 273 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 CAVIN3Q969G5 261 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 TMEM41AQ96HV5 264 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 TSNARE1Q96NA8 513 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 RUNDC3BQ96NL0 473 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 FAM111AQ96PZ2 611 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 SERINC2Q96SA4 455 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 BEX2Q9BXY8 128 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 OPN3Q9H1Y3 402 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 ACBD3Q9H3P7 528 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 ESRP2Q9H6T0 727 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 L2HGDHQ9H9P8 463 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 PELI2Q9HAT8 420 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 EIF2B3Q9NR50 452 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 FBXO6Q9NRD1 293 aaPredicted RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 ELOVL5Q9NYP7 299 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 IFNKQ9P0W0 207 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 COPS7AQ9UBW8 275 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 LPAR3Q9UBY5 353 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 LAMP3Q9UQV4 416 aa6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 MRPS33Q9Y291 106 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-206ENST00000563343 IGHV4-30-2A0A087WSY4 118 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 GOLGA6L9A6NEM1 432 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 BTNL10A8MVZ5 291 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 C16orf97H3BN30 126 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 PFDN6O15212 129 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ERI3O43414 337 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 LIASO43766 372 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 OR10H2O60403 315 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 SMNDC1O75940 238 aaKnown RBP eCLIP6.98□□□□□ -1.297e-11■■■□□ 15.1
HERPUD1-206ENST00000563343 SNX4O95219 450 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 PGRP06401 933 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 CRHP06850 196 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ZSCAN5DPP0CG00 497 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 TNNI3P19429 210 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 SAT1P21673 171 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 CHMP24386 653 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 SERPINB3P29508 390 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 GMPRP36959 345 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 CDKN1AP38936 164 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 CASP3P42574 277 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 MAGEA1P43355 309 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 LHX2P50458 406 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 GFRA1P56159 465 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 FBXW4P57775 412 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 VLDLRP98155 873 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ID2Q02363 134 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 STX4Q12846 297 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 EFTUD2Q15029 972 aaKnown RBP eCLIP6.98□□□□□ -1.292e-9■■■■■ 31.3
HERPUD1-206ENST00000563343 EBPQ15125 230 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 RBBP5Q15291 538 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 RPS6KA2Q15349 733 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ANKRD34AQ69YU3 496 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF470Q6ECI4 717 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ADAM5Q6NVV9 412 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ABHD17CQ6PCB6 329 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 TMEM64Q6YI46 380 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 TMPRSS11BQ86T26 416 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 LRRC57Q8N9N7 239 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 OR2L5Q8NG80 312 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 AKAP1Q92667 903 aaKnown RBP eCLIP6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 UCN3Q969E3 161 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 FBXL8Q96CD0 374 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 TRMT61AQ96FX7 289 aaKnown RBP6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 FBXL20Q96IG2 436 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 FAR2Q96K12 515 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 AIF1LQ9BQI0 150 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 OR2B2Q9GZK3 357 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 WWTR1Q9GZV5 400 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 PRDM7Q9NQW5 492 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 WWOXQ9NZC7 414 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 BFARQ9NZS9 450 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 HEY2Q9UBP5 337 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 MAPRE3Q9UPY8 281 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 CADP27708 2225 aa6.98□□□□□ -1.29
HERPUD1-206ENST00000563343 ZCWPW2A0A1B0GU75 182 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 H0Y3Z8 333 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 PLOD2O00469 737 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 GNB5O14775 395 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 FGF17O60258 216 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 MFAP3LO75121 409 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF708P17019 499 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 CETN2P41208 172 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 PTGDSP41222 190 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 SLC1A2P43004 574 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 MSH2P43246 934 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 STT3AP46977 705 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 STARP49675 285 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 PLA2G16P53816 162 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 CLDN18P56856 261 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 SLC37A1P57057 533 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 SRYQ05066 204 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 TOMM20Q15388 145 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 GUSBP1Q15486 140 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 TIGD3Q6B0B8 471 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 ADNP2Q6IQ32 1131 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 LRRC8EQ6NSJ5 796 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 BHLHB9Q6PI77 547 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF793Q6ZN11 406 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms