RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	E2F2	Q14209	437 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	KCTD19	Q17RG1	926 aa	Predicted RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	PRAMEF9	Q5VWM5	478 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	TRIM40	Q6P9F5	258 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	ZNF793	Q6ZN11	406 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	C20orf204	Q6ZNR8	217 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	VASH1	Q7L8A9	365 aa	Predicted RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	TMEM151A	Q8N4L1	468 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	ZNF441	Q8N8Z8	693 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	SREK1	Q8WXA9	508 aa	Known RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	WDR34	Q96EX3	536 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	ZNF597	Q96LX8	424 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	TRIB1	Q96RU8	372 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	SECISBP2	Q96T21	854 aa	Known RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	DOHH	Q9BU89	302 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	G6PC3	Q9BUM1	346 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	ANGPTL4	Q9BY76	406 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	REXO4	Q9GZR2	422 aa	Known RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	ZNF701	Q9NV72	531 aa	Predicted RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	COPS7A	Q9UBW8	275 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	ZNF490	Q9ULM2	529 aa	Predicted RBP	7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	C15orf41	Q9Y2V0	281 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	DYRK1B	Q9Y463	629 aa		7.59	□□□□□ -1.19
CKLF-208	ENST00000563092	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	ERN1	O75460	977 aa	Known RBP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	TNFSF13	O75888	250 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SNX4	O95219	450 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	ACSL3	O95573	720 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	GUCA1C	O95843	209 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	ACTL6A	O96019	429 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	CLPS	P04118	112 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SAT1	P21673	171 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	CRYGS	P22914	178 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	HPD	P32754	393 aa	Predicted RBP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	ANP32A	P39687	249 aa	Known RBP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	PTH2R	P49190	550 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	HNMT	P50135	292 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	PGGT1B	P53609	377 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	NAGLU	P54802	743 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SLC37A1	P57057	533 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	BIK	Q13323	160 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SLBP	Q14493	270 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	EBP	Q15125	230 aa	Known RBP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SPRED3	Q2MJR0	410 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	ADNP2	Q6IQ32	1131 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	HEPHL1	Q6MZM0	1159 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	TMEM81	Q6P7N7	255 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	DGAT2L6	Q6ZPD8	337 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	GSTA5	Q7RTV2	222 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	KIAA1328	Q86T90	577 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	CCDC116	Q8IYX3	515 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	BBOF1	Q8ND07	529 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SPPL2A	Q8TCT8	520 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SLC44A1	Q8WWI5	657 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	WFIKKN1	Q96NZ8	548 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	CCL19	Q99731	98 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	MAPKAP1	Q9BPZ7	522 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	WWTR1	Q9GZV5	400 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	PIGM	Q9H3S5	423 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	PLAC1	Q9HBJ0	212 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	IARS2	Q9NSE4	1012 aa	Known RBP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	CLCF1	Q9UBD9	225 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	NDRG3	Q9UGV2	375 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	CAMK2A	Q9UQM7	478 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	EIF3L	Q9Y262	564 aa	Known RBP	7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	SLC6A5	Q9Y345	797 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	DOCK7	Q96N67	2140 aa		7.58	□□□□□ -1.2
CKLF-208	ENST00000563092	OR6C76	A6NM76	312 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	RNF212B	A8MTL3	300 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	MSTN	O14793	375 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	FGF17	O60258	216 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	TMCC2	O75069	709 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	H2AFY	O75367	372 aa	Known RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	ZNF37A	P17032	561 aa	Predicted RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	TNNI3	P19429	210 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	CD22	P20273	847 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	ATP5A1	P25705	553 aa	Known RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	PTPN6	P29350	595 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	GALNS	P34059	522 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	GGT5	P36269	586 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	CASP3	P42574	277 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	KCNC1	P48547	511 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	EEF1A1	P68104	462 aa	Known RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	GPS1	Q13098	491 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	CRYM	Q14894	314 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	EIPR1	Q53HC9	387 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	EEF1A1P5	Q5VTE0	462 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	NAT8L	Q8N9F0	302 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	ACOT4	Q8N9L9	421 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	FAM13C	Q8NE31	585 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	GABPB2	Q8TAK5	448 aa	Predicted RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	ABTB1	Q969K4	478 aa	Predicted RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	TP53INP1	Q96A56	240 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	CTHRC1	Q96CG8	243 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	PERP	Q96FX8	193 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	TMEM41A	Q96HV5	264 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	JSRP1	Q96MG2	331 aa	Predicted RBP	7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	RILP	Q96NA2	401 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	RUNDC3B	Q96NL0	473 aa		7.57	□□□□□ -1.2
CKLF-208	ENST00000563092	GNRHR2	Q96P88	292 aa		7.57	□□□□□ -1.2

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