RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CNRIP1Q96F85 164 aaPredicted RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 ZNF556Q9HAH1 456 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 KCNK12Q9HB15 430 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 CCNB1IP1Q9NPC3 277 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 TRPC4Q9UBN4 977 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 RNF6Q9Y252 685 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 PCDHGA10Q9Y5H3 936 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 HS3ST3A1Q9Y663 406 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 GOLGA4Q13439 2230 aaKnown RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 ZNF99A8MXY4 864 aaPredicted RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 C10orf142B7Z368 130 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 TMX2-CTNND1H3BSU7 103 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 PROM1O43490 865 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 MRPS14O60783 128 aaKnown RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 NDUFS2O75306 463 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 INMTO95050 263 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 CCNA2P20248 432 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 MAPK10P53779 464 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 GP2P55259 537 aaKnown RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 RGS1Q08116 209 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 CCINQ13939 588 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 SYPL1Q16563 259 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 ZNF750Q32MQ0 723 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 Q6ZSR6 202 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 TRIM73Q86UV7 250 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 ZNF540Q8NDQ6 660 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 HMGB4Q8WW32 186 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 GAL3ST3Q96A11 431 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 MOAP1Q96BY2 351 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 COL21A1Q96P44 957 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 ALPK1Q96QP1 1244 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 OR2A14Q96R47 310 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 MAPKAP1Q9BPZ7 522 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 TREX2Q9BQ50 279 aaPredicted RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 RSPO3Q9BXY4 272 aaPredicted RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 RHCGQ9UBD6 479 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 GPC6Q9Y625 555 aaPredicted RBP9.27□□□□□ -0.93
SMG1-205ENST00000561947 MTCH2Q9Y6C9 303 aa9.27□□□□□ -0.93
SMG1-205ENST00000561947 ARHGEF17Q96PE2 2063 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 OR2A25A4D2G3 310 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 SHISA7A6NL88 538 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FFAR1O14842 300 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 RGS10O43665 173 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 SERPINB7O75635 380 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 VIPP01282 170 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 NR2F1P10589 423 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ALPPL2P10696 532 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 CSNK2A2P19784 350 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 FUT4P22083 530 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 PPP2R1BP30154 601 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 CD6P30203 668 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 PTGER1P34995 402 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 GSSP48637 474 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ANXA11P50995 505 aaKnown RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 CSNK2BP67870 215 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 BTN3A2P78410 334 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 CEBPEQ15744 281 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 GPR19Q15760 415 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FGD3Q5JSP0 725 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 COLEC12Q5KU26 742 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 BHLHB9Q6PI77 547 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 TDHQ8IZJ6 230 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 PARP8Q8N3A8 854 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 KCT2Q8NC54 265 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FAM81AQ8TBF8 368 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 XAGE5Q8WWM1 108 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 IPCEF1Q8WWN9 437 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 FKBP10Q96AY3 582 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ZNF354BQ96LW1 612 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FCRL4Q96PJ5 515 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 GPN2Q9H9Y4 310 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 GIMAP4Q9NUV9 329 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 USP36Q9P275 1121 aaKnown RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 SEC14L3Q9UDX4 400 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 WARS2Q9UGM6 360 aaKnown RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 BRWD1Q9NSI6 2320 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 TOR1BO14657 336 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 TNFSF14O43557 240 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 MT-ND2P03891 347 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FHP07954 510 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ZNF888P0CJ79 500 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 C8orf89P0DMQ9 161 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 GLULP15104 373 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 UGT2B7P16662 529 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 FEN1P39748 380 aaKnown RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 PRKAG1P54619 331 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ILF3Q12906 894 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMG1-205ENST00000561947 NFATC3Q12968 1075 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ZNF770Q6IQ21 691 aaPredicted RBP9.26□□□□□ -0.93
SMG1-205ENST00000561947 FBXO42Q6P3S6 717 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 ABI3BPQ7Z7G0 1075 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 KRT73Q86Y46 540 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 TRIM48Q8IWZ4 208 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 AQP11Q8NBQ7 271 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 OR56A1Q8NGH5 318 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 BBS10Q8TAM1 723 aa9.26□□□□□ -0.93
SMG1-205ENST00000561947 UTP15Q8TED0 518 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms