RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 TRMT11Q7Z4G4 463 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 ABI3BPQ7Z7G0 1075 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 TSPAN33Q86UF1 283 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SLITRK4Q8IW52 837 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SLC43A2Q8N370 569 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PTGR2Q8N8N7 351 aaPredicted RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 B3GNT7Q8NFL0 401 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 OR10A6Q8NH74 314 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 MOSPD2Q8NHP6 518 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 RNASE11Q8TAA1 199 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 CEP76Q8TAP6 659 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 ZNF417Q8TAU3 575 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 NANPQ8TBE9 248 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 NETO1Q8TDF5 533 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 RNF139Q8WU17 664 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 SLC35F5Q8WV83 523 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PHF21BQ96EK2 531 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PHYHIPLQ96FC7 376 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 RPL10LQ96L21 214 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 TEX37Q96LM6 180 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 CMTM3Q96MX0 182 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 ZNF587Q96SQ5 575 aaPredicted RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 TBL1YQ9BQ87 522 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 CPPED1Q9BRF8 314 aaPredicted RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 RHNO1Q9BSD3 238 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 DERL2Q9GZP9 239 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 EVA1AQ9H8M9 152 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 CYSLTR2Q9NS75 346 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 IMPAD1Q9NX62 359 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 THUMPD1Q9NXG2 353 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 VNN3Q9NY84 501 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 UBP1Q9NZI7 540 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 FBXL3Q9UKT7 428 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 PCDHGA9Q9Y5G4 932 aaKnown RBP6.92□□□□□ -1.3
CDH1-203ENST00000561751 V9GYQ6 96 aa6.92□□□□□ -1.3
CDH1-203ENST00000561751 TEX13CA0A0J9YWL9 993 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ISM1B1AKI9 464 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 NPIPB8E9PQR5 432 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GFRA2O00451 464 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 SCAMP3O14828 347 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 SCAMP1O15126 338 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 NUPL2O15504 423 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 MFSD11O43934 449 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 LCMT2O60294 686 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 GALR3O60755 368 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 HPGDSO60760 199 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 RP2O75695 350 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 PAK4O96013 591 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 MT-CYBP00156 380 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 APOC3P02656 99 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 TCRBP04435 133 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 IL5P05113 134 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 LPLP06858 475 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 THP07101 528 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 HOXC4P09017 264 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 HOXC6P09630 235 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GABRA1P14867 456 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GOT1P17174 413 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 HOXB9P17482 250 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 ENGP17813 658 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 RHCEP18577 417 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 PVALBP20472 110 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 SAT1P21673 171 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 PPIBP23284 216 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 APEX1P27695 318 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 RBMS1P29558 406 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 HOXC13P31276 330 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 KDELR2P33947 212 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ADRA1AP35348 466 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GATA4P43694 442 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 BDKRB1P46663 353 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 TAS2R60P59551 318 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 PITPNAQ00169 270 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 DSC1Q08554 894 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ACSM1Q08AH1 577 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 SREBF2Q12772 1141 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 TDGQ13569 410 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GSG1Q2KHT4 349 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 SLC25A52Q3SY17 297 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 SYTL3Q4VX76 610 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 SOWAHCQ53LP3 525 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 PAN3Q58A45 887 aaKnown RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 GPRC6AQ5T6X5 926 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 FAM69AQ5T7M9 428 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 NBPF12Q5TAG4 269 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 FKBP1CQ5VVH2 108 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 ANKRD34AQ69YU3 496 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 KIAA1161Q6NSJ0 714 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 UNC5DQ6UXZ4 953 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 GCNT7Q6ZNI0 430 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 C17orf107Q6ZR85 190 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 Q6ZSR9 355 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 CHMP1BQ7LBR1 199 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 LRRC28Q86X40 367 aaPredicted RBP6.91□□□□□ -1.3
CDH1-203ENST00000561751 ADGRG2Q8IZP9 1017 aa6.91□□□□□ -1.3
CDH1-203ENST00000561751 THEM5Q8N1Q8 247 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms