RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 ACAD8Q9UKU7 415 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 ERVK-19Q9WJR5 959 aa10.72□□□□□ -0.69
USP3-220ENST00000561381 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.72□□□□□ -0.69
USP3-220ENST00000561381 A0A0A6YYD5 115 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 TRGV5A0A0B4J1U4 118 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 PROM1O43490 865 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 KLK8O60259 260 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 SUSD5O60279 629 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 GBAP04062 536 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 CLPSP04118 112 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 C2P06681 752 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 FREM3P0C091 2139 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 GFAPP14136 432 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 STX2P32856 288 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 BSGP35613 385 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 PIK3CBP42338 1070 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 PIK3CGP48736 1102 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 NEK2P51955 445 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 DLX5P56178 289 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 RIPPLY3P57055 190 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 SNTB1Q13884 538 aaKnown RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 CPSF6Q16630 551 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP3-220ENST00000561381 UBAP2Q5T6F2 1119 aaKnown RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 MRM1Q6IN84 353 aaKnown RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 TMEM64Q6YI46 380 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ST13P4Q8IZP2 240 aaPredicted RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 C17orf53Q8N3J3 647 aaPredicted RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 ZCCHC7Q8N3Z6 543 aaKnown RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 FAM13CQ8NE31 585 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 SLC22A8Q8TCC7 542 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 PAQR8Q8TEZ7 354 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 TANKQ92844 425 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ZNF559Q9BR84 538 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 SLC6A15Q9H2J7 730 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ZNF703Q9H7S9 590 aaPredicted RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 ACTR8Q9H981 624 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 MS4A12Q9NXJ0 267 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ADGRE2Q9UHX3 823 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 PHF11Q9UIL8 331 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ACOT9Q9Y305 439 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 UTP11Q9Y3A2 253 aaKnown RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 RNF11Q9Y3C5 154 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ASB4Q9Y574 426 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 ANGPTL3Q9Y5C1 460 aa10.71□□□□□ -0.69
USP3-220ENST00000561381 CHCHD2Q9Y6H1 151 aaPredicted RBP10.71□□□□□ -0.69
USP3-220ENST00000561381 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.7
USP3-220ENST00000561381 IQANK1A0A1B0GTG1 560 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 ESYT3A0FGR9 886 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 FOXO6A8MYZ6 492 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 PGRMC2O15173 223 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 DYRK3O43781 588 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 OR10H2O60403 315 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 HCN1O60741 890 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 SIX3O95343 332 aaPredicted RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 GPR75O95800 540 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 AIFM1O95831 613 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 FBXO45P0C2W1 286 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 FAM58BPP0C7Q3 252 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 TLX1P31314 330 aaPredicted RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 BUD31P41223 144 aaPredicted RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 ZFP36L2P47974 494 aaKnown RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 TRPC1P48995 793 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 SLC37A1P57057 533 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 KCNJ2P63252 427 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 GUCY2DQ02846 1103 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 EBPQ15125 230 aaKnown RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 C1orf185Q5T7R7 199 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 WLSQ5T9L3 541 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 LIPJQ5W064 366 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 SPNS3Q6ZMD2 512 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 RNF111Q6ZNA4 994 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 SEM1Q6ZVN7 128 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 GOLGA7Q7Z5G4 137 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 TMEM200AQ86VY9 491 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 RHEBL1Q8TAI7 183 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 RIT1Q92963 219 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 SARAFQ96BY9 339 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 ART5Q96L15 291 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 JSRP1Q96MG2 331 aaPredicted RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 GPR78Q96P69 363 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 CENPKQ9BS16 269 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 WWTR1Q9GZV5 400 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 DDX31Q9H8H2 851 aaKnown RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 ZFP64Q9NPA5 681 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 SNX15Q9NRS6 342 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 CNOT11Q9UKZ1 510 aaKnown RBP10.7□□□□□ -0.7
USP3-220ENST00000561381 TSC22D4Q9Y3Q8 395 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 PCDHGA11Q9Y5H2 935 aa10.7□□□□□ -0.7
USP3-220ENST00000561381 AKAP6Q13023 2319 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 A0A087X1B8 175 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 A0A096LPK6 155 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 SYCE1LA8MT33 242 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 KDM4EB2RXH2 506 aaPredicted RBP10.69□□□□□ -0.7
USP3-220ENST00000561381 H0YIV9 168 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 WDR1O75083 606 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 NR2F6P10588 404 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 PTX3P26022 381 aaPredicted RBP10.69□□□□□ -0.7
USP3-220ENST00000561381 SERPINB3P29508 390 aa10.69□□□□□ -0.7
USP3-220ENST00000561381 SSTR4P31391 388 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms