RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TNFRSF12AQ9NP84 129 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 NECTIN3Q9NQS3 549 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 NLE1Q9NVX2 485 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 AIPL1Q9NZN9 384 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 MAPRE3Q9UPY8 281 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 MAGED1Q9Y5V3 778 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 SLC22A7Q9Y694 548 aa4.81□□□□□ -1.64
HERC1-213ENST00000561359 RAI1Q7Z5J4 1906 aaPredicted RBP4.81□□□□□ -1.64
HERC1-213ENST00000561359 A0A1W2PNV4 684 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 A0A1W2PP18 115 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 TMEM89A2RUT3 159 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 LRRC14BA6NHZ5 514 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ZNF839A8K0R7 811 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 FAM157AC9JC47 383 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 H0Y3Z8 333 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 H7C0S8 307 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 KLF4O43474 513 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 OR10H2O60403 315 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 GALR3O60755 368 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 VENTXO95231 258 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CYP1A2P05177 515 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 SLC35G6P0C7Q6 338 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CCDC166P0CW27 439 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 RNH1P13489 461 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 SLC25A16P16260 332 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 PPP2R1BP30154 601 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ADRA1AP35348 466 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 RPL21P46778 160 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 PCYT1AP49585 367 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 PNLIPRP1P54315 467 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 EIF3BP55884 814 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 DSCR9P59020 149 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 TAS2R40P59535 323 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ABATP80404 500 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 SRYQ05066 204 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 MSLNQ13421 630 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 BMPR2Q13873 1038 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 KRT31Q15323 416 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ANKRD20A4Q4UJ75 823 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ODF2Q5BJF6 829 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ANKRD20A2Q5SQ80 823 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 DCST1Q5T197 706 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ANKRD20A1Q5TYW2 823 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ANKRD20A3Q5VUR7 823 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CAPN13Q6MZZ7 669 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 VHLLQ6RSH7 139 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ZNF474Q6S9Z5 364 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 ZNF571Q7Z3V5 609 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 ASPGQ86U10 573 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 LDB1Q86U70 411 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 GRAMD2AQ8IUY3 354 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 KRT222Q8N1A0 295 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 PPFIBP2Q8ND30 876 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 PPHLN1Q8NEY8 458 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 SMAP2Q8WU79 429 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CAVIN3Q969G5 261 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 REPS1Q96D71 796 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 PGM2Q96G03 612 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 VAT1Q99536 393 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 TUBA1CQ9BQE3 449 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 DOHHQ9BU89 302 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 NTMT1Q9BV86 223 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CARD6Q9BX69 1037 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 UGT2B28Q9BY64 529 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 OPN3Q9H1Y3 402 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 HAUS4Q9H6D7 363 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 MANSC1Q9H8J5 431 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 ADAP2Q9NPF8 381 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.8□□□□□ -1.64
HERC1-213ENST00000561359 EIF2B3Q9NR50 452 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 ELOVL5Q9NYP7 299 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 SAE1Q9UBE0 346 aaPredicted RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 TRHDEQ9UKU6 1024 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 PPIEQ9UNP9 301 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 R3HDM2Q9Y2K5 976 aaKnown RBP4.8□□□□□ -1.64
HERC1-213ENST00000561359 PCDHGB1Q9Y5G3 927 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 CLCA3PQ9Y6N3 262 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 HEATR5BQ9P2D3 2071 aa4.8□□□□□ -1.64
HERC1-213ENST00000561359 EML6Q6ZMW3 1958 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 KCNE1BA0A087WTH5 132 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 CCDC162PA2VCL2 907 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 FRG2CA6NGY1 282 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 C3orf70A6NLC5 250 aaPredicted RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 ZNF487B1APH4 448 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 GFYI3L273 518 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 CLOCKO15516 846 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 ZNF354AO60765 605 aaPredicted RBP4.79□□□□□ -1.64
HERC1-213ENST00000561359 TNFSF13O75888 250 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 LRATO95237 230 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 SERPINC1P01008 464 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 TGFAP01135 160 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 C1QAP02745 245 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 IFNA16P05015 189 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 SERPIND1P05546 499 aa4.79□□□□□ -1.64
HERC1-213ENST00000561359 THBDP07204 575 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms