RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SLC26A7Q8TE54 656 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CLIP3Q96DZ5 547 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 NEURL3Q96EH8 262 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 RBM18Q96H35 190 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 RSRC1Q96IZ7 334 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 CSF3RQ99062 836 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 PELOQ9BRX2 385 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 EFHD1Q9BUP0 239 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 TRIM8Q9BZR9 551 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 PCDHAC1Q9H158 963 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CXorf36Q9H7Y0 433 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SLAMF7Q9NQ25 335 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 PRTFDC1Q9NRG1 225 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 RXFP3Q9NSD7 469 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 TRPC4Q9UBN4 977 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 EGFL7Q9UHF1 273 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 ERVK-11Q9UQG0 969 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 MMACHCQ9Y4U1 282 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 MAU2Q9Y6X3 613 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 AQP12BA6NM10 295 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 PLOD2O00469 737 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 OR10H2O60403 315 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 LDB3O75112 727 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 SCRG1O75711 98 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 SOX30O94993 753 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 KCNK5O95279 499 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 MED26O95402 600 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 ATP1B1P05026 303 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 IFI6P09912 130 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 UMPSP11172 480 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 HOXB6P17509 224 aaKnown RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 AGXTP21549 392 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 GCGRP47871 477 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 OR1D4P47884 311 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 CDK9P50750 372 aaKnown RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 OR4D2P58180 307 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 OCA2Q04671 838 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 RBBP4Q09028 425 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 C16orf72Q14CZ0 275 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 TRIP6Q15654 476 aaKnown RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.68□□□□□ -0.86
USP3-219ENST00000561326 ARHGAP40Q5TG30 622 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 SAXO2Q658L1 398 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 CPZQ66K79 652 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 LCN8Q6JVE9 175 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 SZRD1Q7Z422 152 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 OR4N5Q8IXE1 308 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 AQP12AQ8IXF9 295 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 C11orf65Q8NCR3 313 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 OR5AK3PQ8NH89 298 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 ANKRD9Q96BM1 317 aaPredicted RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 ELP4Q96EB1 424 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 NSMCE2Q96MF7 247 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 ALOXE3Q9BYJ1 711 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 IKZF5Q9H5V7 419 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 GORASP2Q9H8Y8 452 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 PARD6AQ9NPB6 346 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 MKKSQ9NPJ1 570 aaPredicted RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 SIRT3Q9NTG7 399 aaPredicted RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 ZCCHC3Q9NUD5 404 aaKnown RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 FAM86C1Q9NVL1 165 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 OCIAD1Q9NX40 245 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 SIDT1Q9NXL6 827 aaKnown RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 SLC39A1Q9NY26 324 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 PTGFRNQ9P2B2 879 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 DHCR7Q9UBM7 475 aaKnown RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 FAF1Q9UNN5 650 aaPredicted RBP9.68□□□□□ -0.86
USP3-219ENST00000561326 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
USP3-219ENST00000561326 A0A087WV62 115 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DUXAA6NLW8 204 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 B4E171 279 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 CXCR6O00574 342 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ARPC2O15144 300 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DYRK3O43781 588 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 FGF17O60258 216 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 PSMG1O95456 288 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ATP6V1G2O95670 118 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 KLK3P07288 261 aaPredicted RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 GGT1P19440 569 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 NT5EP21589 574 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 TSPAN7P41732 249 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 GZMMP51124 257 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 PRKAG1P54619 331 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 POLE2P56282 527 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 RAB15P59190 212 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DCDP81605 110 aaKnown RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 MAT1AQ00266 395 aaKnown RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 RHDQ02161 417 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 GAB1Q13480 694 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 CCNIQ14094 377 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 VEZF1Q14119 521 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 GNA13Q14344 377 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 FXNQ16595 210 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ZNF630Q2M218 657 aaPredicted RBP9.67□□□□□ -0.86
USP3-219ENST00000561326 VMACQ2NL98 169 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 ZNF750Q32MQ0 723 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 NKAIN1Q4KMZ8 207 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.67□□□□□ -0.86
USP3-219ENST00000561326 GCNT6Q5T4J0 391 aa9.67□□□□□ -0.86
USP3-219ENST00000561326 INTS11Q5TA45 600 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms