RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ARMC10Q8N2F6 343 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 ANKRD42Q8N9B4 389 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 MDS2Q8NDY4 140 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 GRHL3Q8TE85 626 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 C16orf78Q8WTQ4 265 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 TWIST2Q8WVJ9 160 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 PAIP2Q9BPZ3 127 aaKnown RBP18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 TUBB1Q9H4B7 451 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 HEY2Q9UBP5 337 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 CES1P1Q9UKY3 287 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 CCL27Q9Y4X3 112 aa18.51■□□□□ 0.55
TSPAN3-210ENST00000561277 SHANK1Q9Y566 2161 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 TMEM200CA6NKL6 621 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 SLC28A1O00337 649 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 RGS14O43566 566 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 OR2J2O76002 312 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 NEURL1O76050 574 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 IGKV3-11P04433 115 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 LINC00032P0C843 101 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 PORP16435 677 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 PTGER1P34995 402 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 CYB561P49447 251 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 NR6A1Q15406 480 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 SPRED3Q2MJR0 410 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 FAM180AQ6UWF9 173 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 GALNT12Q8IXK2 581 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 CLYBLQ8N0X4 340 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 TMEM156Q8N614 296 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 HORMAD2Q8N7B1 307 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 OR2T11Q8NH01 316 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 C5orf34Q96MH7 638 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 AGPAT4Q9NRZ5 378 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 MYOTQ9UBF9 498 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 UTS2RQ9UKP6 389 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 PSME2Q9UL46 239 aa18.5■□□□□ 0.55
TSPAN3-210ENST00000561277 SEC22BO75396 215 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 NEFHP12036 1026 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 CD46P15529 392 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 UQCRFS1P47985 274 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 HLCSP50747 726 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 SSR4P51571 173 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 HK2P52789 917 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 ZNF763Q0D2J5 394 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 HEPACAMQ14CZ8 416 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 C6orf163Q5TEZ5 329 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 CES4AQ5XG92 561 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 RPUSD3Q6P087 351 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 C9orf40Q8IXQ3 194 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 OR5L2Q8NGL0 311 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 OR6Y1Q8NGX8 325 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 CXorf21Q9HAI6 301 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 LRTM1Q9HBL6 345 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 TMBIM4Q9HC24 238 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 PFDN4Q9NQP4 134 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 SIRT5Q9NXA8 310 aa18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 YARS2Q9Y2Z4 477 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-210ENST00000561277 UBR5O95071 2799 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 TCP11X1B4DZS4 312 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 PIP5K1BO14986 540 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 BIRC5O15392 142 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 LYPLA1O75608 230 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 SLC25A12O75746 678 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 RASAL1O95294 804 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 HSPA4LO95757 839 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 SERPINE1P05121 402 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 FGF4P08620 206 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 CT62P0C5K7 136 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 DHRS4L1P0CG22 281 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 GNLYP22749 145 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 SSTR4P31391 388 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 MAGOHP61326 146 aaKnown RBP18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 KCNC4Q03721 635 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 NOXRED1Q6NXP6 359 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 RNF111Q6ZNA4 994 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 CYP4Z2PQ8N1L4 340 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 GALNT11Q8NCW6 608 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 OR8K3Q8NH51 312 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 EXOSC8Q96B26 276 aaKnown RBP18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 CNRIP1Q96F85 164 aaPredicted RBP18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 TAAR6Q96RI8 345 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 GAL3ST4Q96RP7 486 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 RASL10BQ96S79 203 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 C1orf109Q9NX04 203 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 ZDHHC2Q9UIJ5 367 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 ZNF780BQ9Y6R6 833 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 BAHCC1Q9P281 2608 aa18.48■□□□□ 0.55
TSPAN3-210ENST00000561277 MYO18BQ8IUG5 2567 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 TMEM120BA0PK00 339 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SKAP2O75563 359 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 DRD2P14416 443 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 GALNSP34059 522 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 TRHRP34981 398 aaPredicted RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 PMP22Q01453 160 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 SRSF11Q05519 484 aaKnown RBP18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 DUSP2Q05923 314 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 INAQ16352 499 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 MAPKAPK3Q16644 382 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 UGT3A2Q3SY77 523 aa18.47■□□□□ 0.55
TSPAN3-210ENST00000561277 Q6ZSR9 355 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms