RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SORT1Q99523 831 aa12.91□□□□□ -0.34
TPM1-230ENST00000561266 BARD1Q99728 777 aaKnown RBP12.91□□□□□ -0.34
TPM1-230ENST00000561266 CXorf21Q9HAI6 301 aa12.91□□□□□ -0.34
TPM1-230ENST00000561266 NMRK1Q9NWW6 199 aa12.91□□□□□ -0.34
TPM1-230ENST00000561266 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
TPM1-230ENST00000561266 EXPH5Q8NEV8 1989 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 TMEM120BA0PK00 339 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 C1orf226A1L170 272 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 NPIPB8E9PQR5 432 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 WWP2O00308 870 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 TM9SF1O15321 606 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 ERAL1O75616 437 aaKnown RBP12.9□□□□□ -0.34
TPM1-230ENST00000561266 RSL1D1O76021 490 aaKnown RBP12.9□□□□□ -0.34
TPM1-230ENST00000561266 ANXA4P09525 319 aaPredicted RBP12.9□□□□□ -0.34
TPM1-230ENST00000561266 MYZAPP0CAP1 466 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 SLC35E2P0CK97 266 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 CPMP14384 443 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 PRPH2P23942 346 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 PIK3R1P27986 724 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 UQCRFS1P47985 274 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 ALDH9A1P49189 494 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
TPM1-230ENST00000561266 AP2B1P63010 937 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 PLIN5Q00G26 463 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 PMP22Q01453 160 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 ASPHQ12797 758 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 ESPL1Q14674 2120 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 OR1C1Q15619 314 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 LTB4RQ15722 352 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 IMPG1Q17R60 797 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 SPRED3Q2MJR0 410 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 RFTN2Q52LD8 501 aaPredicted RBP12.9□□□□□ -0.34
TPM1-230ENST00000561266 TTMPQ5BVD1 217 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 FAM71E1Q6IPT2 247 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 RNF165Q6ZSG1 346 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 LGI4Q8N135 537 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 NUDT8Q8WV74 236 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 RBM18Q96H35 190 aaKnown RBP12.9□□□□□ -0.34
TPM1-230ENST00000561266 FCRL1Q96LA6 429 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 CNPPD1Q9BV87 410 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.34
TPM1-230ENST00000561266 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
TPM1-230ENST00000561266 RP1L1Q8IWN7 2480 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 NUP214P35658 2090 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 TRAV17A0A0B4J275 112 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 GNG14A0A1W2PPG7 69 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 TCP11X1B4DZS4 312 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 SLC28A1O00337 649 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 LSM1O15116 133 aaKnown RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 BIRC5O15392 142 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 OR10H2O60403 315 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 PRAMEF2O60811 474 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 SEC22BO75396 215 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 NME6O75414 186 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 SKAP2O75563 359 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 ITGA10O75578 1167 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 OR2J2O76002 312 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 ZFAND5O76080 213 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 OR6B1O95007 311 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 ZWINTO95229 277 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 ZIC2O95409 532 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 NADKO95544 446 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 SERPINE1P05121 402 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 SLC37A1P57057 533 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 ABCE1P61221 599 aaKnown RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.354e-10■■■□□ 14.7
TPM1-230ENST00000561266 PRICKLE4Q2TBC4 344 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 XKR7Q5GH72 579 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 NOXRED1Q6NXP6 359 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 HSDL2Q6YN16 418 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 MDGA2Q7Z553 956 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 ZNF781Q8N8C0 355 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 ZNF615Q8N8J6 731 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 MGARPQ8TDB4 240 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 GRHL3Q8TE85 626 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 RIT1Q92963 219 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 KLHL29Q96CT2 875 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 SCMH1Q96GD3 660 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 FBXL20Q96IG2 436 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 UTP23Q9BRU9 249 aaKnown RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 LRTM1Q9HBL6 345 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 MAT2BQ9NZL9 334 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 BAIAP2L1Q9UHR4 511 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 TEKT2Q9UIF3 430 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 UTS2RQ9UKP6 389 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
TPM1-230ENST00000561266 UBR5O95071 2799 aaPredicted RBP12.89□□□□□ -0.35
TPM1-230ENST00000561266 NCKAP5O14513 1909 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
TPM1-230ENST00000561266 ATP6AP2O75787 350 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms