RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 DUSP4Q13115 394 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 ATP13A5Q4VNC0 1218 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 SYT14P1Q58G82 188 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 CRB2Q5IJ48 1285 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 KIF18BQ86Y91 864 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 MARCH9Q86YJ5 346 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 GPC2Q8N158 579 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 ZNF366Q8N895 744 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 WBP2Q969T9 261 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 KCNJ15Q99712 375 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 ANGPT4Q9Y264 503 aa15.67■□□□□ 0.1
TPM1-228ENST00000560975 QSOX1O00391 747 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 SEMA7AO75326 666 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 CBSLP0DN79 551 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 ZNF8P17098 575 aaPredicted RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 ELAVL4P26378 380 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 CBSP35520 551 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 HNMTP50135 292 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 ZNF81P51508 661 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 RPS13P62277 151 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 PURAQ00577 322 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 EXOSC2Q13868 293 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 CCL14Q16627 93 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 LHFPL3Q86UP9 236 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 THOC6Q86W42 341 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 GHDCQ8N2G8 530 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 UCN3Q969E3 161 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 DACT3Q96B18 629 aaPredicted RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 CREB3L1Q96BA8 519 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 UROC1Q96N76 676 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 MED18Q9BUE0 208 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 C1QTNF6Q9BXI9 259 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 HEXA-AS1Q9H8Q6 139 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 RC3H2Q9HBD1 1191 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 GPR52Q9Y2T5 361 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 A0A1B0GVM2 712 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 SMAD6O43541 496 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 BNIP3LO60238 219 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 ZNF623O75123 536 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 C8GP07360 202 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 CXCL3P19876 107 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 ETV3P41162 512 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 LSM11P83369 360 aaKnown RBP eCLIP15.66■□□□□ 0.14e-12■□□□□ 10.6
TPM1-228ENST00000560975 DBPQ10586 325 aaPredicted RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 NAE1Q13564 534 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 TSTA3Q13630 321 aaPredicted RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 MRPL58Q14197 206 aaKnown RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 CCNJQ5T5M9 372 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 CXCL17Q6UXB2 119 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 OXR1Q8N573 874 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 ZNF582Q96NG8 517 aaPredicted RBP15.66■□□□□ 0.1
TPM1-228ENST00000560975 WFDC6Q9BQY6 131 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 EXTL2Q9UBQ6 330 aa15.66■□□□□ 0.1
TPM1-228ENST00000560975 CD8B2A6NJW9 211 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 TPOP07202 933 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 CD8BP10966 210 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 GINS1Q14691 196 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 SUZ12Q15022 739 aaKnown RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 LYPLAL1Q5VWZ2 237 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ACSM5Q6NUN0 579 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 TNFAIP8L2Q6P589 184 aaPredicted RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 BRAT1Q6PJG6 821 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 KRT74Q7RTS7 529 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 C11orf24Q96F05 449 aaPredicted RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 FOLH1BQ9HBA9 442 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 NUDT15Q9NV35 164 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 RNF181Q9P0P0 153 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 LOC105369274A0A096LPK9 316 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 LALBAP00709 142 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ELK1P19419 428 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 EPHA5P54756 1037 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ZNF630Q2M218 657 aaPredicted RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 LIPJQ5W064 366 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 BICRALQ6AI39 1079 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 PGBD2Q6P3X8 592 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 FAM122CQ6P4D5 195 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 IL20RBQ6UXL0 311 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 SLC30A8Q8IWU4 369 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 OR4N4Q8N0Y3 316 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ABCG5Q9H222 651 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 TMEM38AQ9H6F2 299 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 MVB12BQ9H7P6 319 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 MGAT4BQ9UQ53 548 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 AUP1Q9Y679 476 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 DOCK3Q8IZD9 2030 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 PCP4L1A6NKN8 68 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 H3BUI4 141 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 DVL2O14641 736 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 OR12D1P0DN82 309 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 PCSK2P16519 638 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 STOMP27105 288 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 TIA1P31483 386 aaKnown RBP eCLIP15.65■□□□□ 0.15e-8■□□□□ 8.7
TPM1-228ENST00000560975 TALDO1P37837 337 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 SRP54P61011 504 aaKnown RBP15.65■□□□□ 0.1
TPM1-228ENST00000560975 DSC1Q08554 894 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 C2orf80Q0P641 193 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 ADAM15Q13444 863 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 OCLNQ16625 522 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 MPEG1Q2M385 716 aa15.65■□□□□ 0.1
TPM1-228ENST00000560975 KLHL12Q53G59 568 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms