RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 A0A087WV62 115 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 RNF103-CHMP3A0A140T963 221 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 B4E171 279 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 PROB1E7EW31 1015 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 PLOD2O00469 737 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ARPC2O15144 300 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 POLR1CO15160 346 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 GSTA4O15217 222 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 EMC8O43402 210 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 LDB3O75112 727 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 DNAJB6O75190 326 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ENTPD5O75356 428 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SCRG1O75711 98 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SOX30O94993 753 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 KCNK5O95279 499 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ATP6V1G2O95670 118 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ONECUT2O95948 504 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SLC35E2P0CK97 266 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 C8orf89P0DMQ9 161 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 UMPSP11172 480 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 BMP2P12643 396 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 HOXB6P17509 224 aaKnown RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 FBLP22087 321 aaKnown RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 GALNSP34059 522 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 MSX2P35548 267 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SOAT1P35610 550 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 FEN1P39748 380 aaKnown RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 TSPAN7P41732 249 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 XCR1P46094 333 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ANXA11P50995 505 aaKnown RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 LIMK1P53667 647 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 AP2B1P63010 937 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 IGLV3-21P80748 117 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SIM1P81133 766 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 MC2RQ01718 297 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 RBBP4Q09028 425 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 STX4Q12846 297 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 GAB1Q13480 694 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 CCNIQ14094 377 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 VEZF1Q14119 521 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SERTAD2Q14140 314 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 C16orf72Q14CZ0 275 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 CYP51A1Q16850 503 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SPDYE7PQ495Y7 208 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 IRAK1BP1Q5VVH5 260 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SAXO2Q658L1 398 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 GLYATQ6IB77 296 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 FAM180BQ6P0A1 224 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ZFP1Q6P2D0 407 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ANGPTL8Q6UXH0 198 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 C6orf120Q7Z4R8 191 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 TMEM126BQ8IUX1 230 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SLC30A8Q8IWU4 369 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ST13P4Q8IZP2 240 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 BHLHE22Q8NFJ8 381 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF675Q8TD23 568 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ELP4Q96EB1 424 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 DUS3LQ96G46 650 aaKnown RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 PEX11GQ96HA9 241 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF578Q96N58 590 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 CMKLR1Q99788 373 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 PELOQ9BRX2 385 aaKnown RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 TRIM8Q9BZR9 551 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 TRIM4Q9C037 500 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 CHST8Q9H2A9 424 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 TMEM38AQ9H6F2 299 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 MKKSQ9NPJ1 570 aaPredicted RBP8.09□□□□□ -1.11
TRAF3-209ENST00000560463 PRTFDC1Q9NRG1 225 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 NTMQ9P121 344 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 HCN3Q9P1Z3 774 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 MMACHCQ9Y4U1 282 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SNX8Q9Y5X2 465 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 SPEGQ15772 3267 aa8.09□□□□□ -1.11
TRAF3-209ENST00000560463 HEATR5AQ86XA9 2040 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 MPDZO75970 2070 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 IGLV3-12A0A075B6K2 115 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 TCRBV3S1A0A5B6 114 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 WASHC1A8K0Z3 465 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 EFCAB7A8K855 629 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 FAM227AF5H4B4 570 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CXCR6O00574 342 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 FGF17O60258 216 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 PLOD3O60568 738 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CPNE3O75131 537 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 PSMG1O95456 288 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 NTRK1P04629 796 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 GPIP06744 558 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 C8BP07358 591 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 GGT1P19440 569 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CRATP43155 626 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 PRIM2P49643 509 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 CDK9P50750 372 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 PDX1P52945 283 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 MVDP53602 400 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 POLE2P56282 527 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 OR4D2P58180 307 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 RAB15P59190 212 aa8.08□□□□□ -1.12
TRAF3-209ENST00000560463 DCDP81605 110 aaKnown RBP8.08□□□□□ -1.12
TRAF3-209ENST00000560463 RHDQ02161 417 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms