RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 KCND3Q9UK17 655 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 COLEC10Q9Y6Z7 277 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 ARRDC5A6NEK1 342 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 POM121BA6NF01 834 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 C4orf51C9J302 202 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MAN2B1O00754 1011 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 VIPP01282 170 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 HOXC4P09017 264 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 HIST1H1TP22492 207 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 ACVR2AP27037 513 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 CMPK1P30085 196 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 GPC1P35052 558 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 ARFIP1P53367 373 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SLAMF1Q13291 335 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MAPK11Q15759 364 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SYT6Q5T7P8 510 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 ABHD17CQ6PCB6 329 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 GPR32P1Q8NGA4 272 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 PROX1Q92786 737 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 EDAQ92838 391 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SIPA1Q96FS4 1042 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SLC35G5Q96KT7 338 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SIGLEC11Q96RL6 698 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MACROD1Q9BQ69 325 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 BCL7BQ9BQE9 202 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 MAN1A2O60476 641 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 FOXD2O60548 495 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 BCAS1O75363 584 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 FADS2O95864 444 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 CBLP22681 906 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 NTSP30990 170 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 AQP6Q13520 282 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 CTF1Q16619 201 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 TOR1AIP1Q5JTV8 583 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 CCDC81Q6ZN84 652 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 USP30Q70CQ3 517 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 AHSA2Q719I0 299 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 CROCCP3Q8IVE0 287 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 PARP8Q8N3A8 854 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ACOT4Q8N9L9 421 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 OR2L5Q8NG80 312 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 OR8K5Q8NH50 307 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ALPK1Q96QP1 1244 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ZNF607Q96SK3 696 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 PRDM7Q9NQW5 492 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 P2RX2Q9UBL9 471 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ENOPH1Q9UHY7 261 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 NCKAP1Q9Y2A7 1128 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 ASB4Q9Y574 426 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
RABGGTA-212ENST00000559974 SCN3AQ9NY46 2000 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 ARHGEF17Q96PE2 2063 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 SLC28A2O43868 658 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 GUCY1B2O75343 617 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 PRKRAO75569 313 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 GABARAPO95166 117 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 FUT4P22083 530 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 ATP5A1P25705 553 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 NCBP2P52298 156 aaKnown RBP eCLIP13.67□□□□□ -0.221e-10■■■□□ 14.8
RABGGTA-212ENST00000559974 LIM2P55344 173 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 CLDN2P57739 230 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 SPCS2Q15005 226 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 COLEC12Q5KU26 742 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 MLIPQ5VWP3 458 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 MRM1Q6IN84 353 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 ZNF425Q6IV72 752 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 ENPP7Q6UWV6 458 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 SZRD1Q7Z422 152 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 TAGAPQ8N103 731 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 DEPDC4Q8N2C3 294 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 MFSD9Q8NBP5 474 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 RHOXF1Q8NHV9 184 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 RASSF5Q8WWW0 418 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 JPH3Q8WXH2 748 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 OR1E3Q8WZA6 343 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 MSANTD3Q96H12 275 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 OR51I1Q9H343 314 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 ZCCHC3Q9NUD5 404 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 PLCXD1Q9NUJ7 323 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 OR6C2Q9NZP2 312 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 RHCGQ9UBD6 479 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 TBC1D29Q9UFV1 150 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 LRP4O75096 1905 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 A0A1W2PR48 441 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 GLOD5A6NK44 160 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 FFAR1O14842 300 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 OR12D1P0DN82 309 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 NR4A1P22736 598 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 NDUFS1P28331 727 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 KCNJ5P48544 419 aa13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-212ENST00000559974 TEKQ02763 1124 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms