RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 C8GP07360 202 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 SERPINA6P08185 405 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 TPM1P09493 284 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 PAX1P15863 534 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 DPP4P27487 766 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 SERPINB3P29508 390 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 IDUAP35475 653 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 UGT2B10P36537 528 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 NPY2RP49146 381 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 STARP49675 285 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 LIM2P55344 173 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 FBXW4P57775 412 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 STXBP1P61764 594 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 RPS4XP62701 263 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 BASP1P80723 227 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 DHX9Q08211 1270 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 THOC5Q13769 683 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 C6orf52Q5T4I8 152 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 DUPD1Q68J44 220 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 CASC4Q6P4E1 433 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 DGAT2L6Q6ZPD8 337 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 STRA8Q7Z7C7 330 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 CAND1Q86VP6 1230 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 MED12LQ86YW9 2145 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 KLHDC8AQ8IYD2 350 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 MYO1HQ8N1T3 1032 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 ARIH2OSQ8N7S6 290 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 CCDC89Q8N998 374 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 FAM83FQ8NEG4 500 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 ZPLD1Q8TCW7 415 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 C1orf54Q8WWF1 131 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 KCNJ9Q92806 393 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 MS4A6EQ96DS6 147 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 LINGO1Q96FE5 620 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 PGM2Q96G03 612 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 SENP5Q96HI0 755 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 MARK4Q96L34 752 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 KRT12Q99456 494 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 NPLQ9BXD5 320 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 TEX10Q9NXF1 929 aaPredicted RBP8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 PSD3Q9NYI0 1048 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 PRDM4Q9UKN5 801 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 MAPRE3Q9UPY8 281 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 C15orf41Q9Y2V0 281 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 USF3Q68DE3 2245 aa8.13□□□□□ -1.11
SNRPA1-208ENST00000559686 HS3ST1O14792 307 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 MSTNO14793 375 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 LIASO43766 372 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 SIX3O95343 332 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 TGM6O95932 706 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 FBXO45P0C2W1 286 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 STIP1P31948 543 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 PGGT1BP53609 377 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 HERVK_113P63132 956 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ERVK-8P63133 956 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 TBL3Q12788 808 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 FAPQ12884 760 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 GPS1Q13098 491 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 KLF1Q13351 362 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 EXOC3L2Q2M3D2 409 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 FNDC7Q5VTL7 733 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 UGT3A1Q6NUS8 523 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ZNF474Q6S9Z5 364 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 NXPE4Q6UWF7 544 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ANGPTL8Q6UXH0 198 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 SLC29A4Q7RTT9 530 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 THOC6Q86W42 341 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 WFDC8Q8IUA0 241 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 PRR22Q8IZ63 422 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 OR56A3Q8NH54 315 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 NUBPLQ8TB37 319 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ZNF669Q96BR6 464 aaPredicted RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 NTNG2Q96CW9 530 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 TRMT61AQ96FX7 289 aaKnown RBP8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 PLPPR2Q96GM1 343 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ZFP3Q96NJ6 502 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 QRFPRQ96P65 431 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 DGAT2Q96PD7 388 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 KIFC1Q9BW19 673 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ERVK-6Q9BXR3 956 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ANGPTL4Q9BY76 406 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 SHARPINQ9H0F6 387 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 SLCO5A1Q9H2Y9 848 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 UBQLN3Q9H347 655 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ACBD3Q9H3P7 528 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 EGFL7Q9UHF1 273 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 DAPP1Q9UN19 280 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 ABCA1O95477 2261 aa8.12□□□□□ -1.11
SNRPA1-208ENST00000559686 MED12Q93074 2177 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 A0A088AWK7 358 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 IQANK1A0A1B0GTG1 560 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 LRIT2A6NDA9 550 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 BTNL10A8MVZ5 291 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 C16orf97H3BN30 126 aa8.11□□□□□ -1.11
SNRPA1-208ENST00000559686 PLOD2O00469 737 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms