RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PPWD1Q96BP3 646 aaKnown RBP20.23■□□□□ 0.83
SNX1-206ENST00000559389 RBM18Q96H35 190 aaKnown RBP20.23■□□□□ 0.83
SNX1-206ENST00000559389 BRINP2Q9C0B6 783 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 MMP25Q9NPA2 562 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 CLCA3PQ9Y6N3 262 aa20.23■□□□□ 0.83
SNX1-206ENST00000559389 DDAH2O95865 285 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 TROVE2P10155 538 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNX1-206ENST00000559389 IDO1P14902 403 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 PCSK2P16519 638 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 TNNI3P19429 210 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 AP2B1P63010 937 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 MPEG1Q2M385 716 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 LINC00303Q3SY05 128 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 GALNT12Q8IXK2 581 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 GALNT16Q8N428 558 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 APCDD1LQ8NCL9 501 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 MORN4Q8NDC4 146 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 SUN3Q8TAQ9 357 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 SLC2A12Q8TD20 617 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 RIT1Q92963 219 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 FBXL20Q96IG2 436 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 CXorf21Q9HAI6 301 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 KCNK13Q9HB14 408 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 DCTN4Q9UJW0 460 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 MAPRE3Q9UPY8 281 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 GPR45Q9Y5Y3 372 aa20.22■□□□□ 0.83
SNX1-206ENST00000559389 GABRR3A8MPY1 467 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 MYO1GB0I1T2 1018 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 DYRK3O43781 588 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 ITGAMP11215 1152 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 DDX5P17844 614 aaKnown RBP20.21■□□□□ 0.83
SNX1-206ENST00000559389 NT5EP21589 574 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 ITGA3P26006 1051 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 NTSP30990 170 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 CCL11P51671 97 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 GPR143P51810 404 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 PGDP52209 483 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 MYBPC3Q14896 1274 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 LTB4RQ15722 352 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 CAMKMTQ7Z624 323 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 OR7A2PQ8NGA2 310 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 ELP5Q8TE02 316 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 NCLNQ969V3 563 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 CHMP6Q96FZ7 201 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 VMP1Q96GC9 406 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 THOC3Q96J01 351 aaKnown RBP20.21■□□□□ 0.83
SNX1-206ENST00000559389 ART5Q96L15 291 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 MARK4Q96L34 752 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 SEMA4CQ9C0C4 833 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 LHPPQ9H008 270 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 SLAMF7Q9NQ25 335 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 MAT2BQ9NZL9 334 aa20.21■□□□□ 0.83
SNX1-206ENST00000559389 ZNF223Q9UK11 482 aaPredicted RBP20.21■□□□□ 0.83
SNX1-206ENST00000559389 E9PBE3 544 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 UBDO15205 165 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 PDPK1O15530 556 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 KLHL41O60662 606 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 IGKV3-11P04433 115 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 CT62P0C5K7 136 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 LSP1P33241 339 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 FRKP42685 505 aaPredicted RBP20.2■□□□□ 0.82
SNX1-206ENST00000559389 GSTA3Q16772 222 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 PRICKLE4Q2TBC4 344 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 PDCD4Q53EL6 469 aaKnown RBP20.2■□□□□ 0.82
SNX1-206ENST00000559389 JMJD6Q6NYC1 403 aaPredicted RBP20.2■□□□□ 0.82
SNX1-206ENST00000559389 KIF2BQ8N4N8 673 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 FDCSPQ8NFU4 85 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 OR1N1Q8NGS0 311 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 ZNF675Q8TD23 568 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 ZNF721Q8TF20 911 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 PSMF1Q92530 271 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 BBS4Q96RK4 519 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 CNPPD1Q9BV87 410 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 DPY30Q9C005 99 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 OR8D2Q9GZM6 311 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 SDR39U1Q9NRG7 319 aaPredicted RBP20.2■□□□□ 0.82
SNX1-206ENST00000559389 GPR83Q9NYM4 423 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 SH3BP4Q9P0V3 963 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 ERVK-19Q9WJR5 959 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 ZFHX4Q86UP3 3567 aa20.2■□□□□ 0.82
SNX1-206ENST00000559389 A0A0G2JND7 137 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 HRKO00198 91 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 PTGER1P34995 402 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 SOX18P35713 384 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 MRPL19P49406 292 aaKnown RBP20.19■□□□□ 0.82
SNX1-206ENST00000559389 GNGT1P63211 74 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 ZNF628Q5EBL2 1059 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 C6orf163Q5TEZ5 329 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 IRAK1BP1Q5VVH5 260 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 CCDC116Q8IYX3 515 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 VWA5B2Q8N398 1253 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 ZNF321PQ8N8H1 164 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 OR9A2Q8NGT5 310 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 BRIX1Q8TDN6 353 aaKnown RBP20.19■□□□□ 0.82
SNX1-206ENST00000559389 DOK4Q8TEW6 326 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 NUDT8Q8WV74 236 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 CIDECQ96AQ7 238 aaPredicted RBP20.19■□□□□ 0.82
SNX1-206ENST00000559389 TESCQ96BS2 214 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 CTHRC1Q96CG8 243 aa20.19■□□□□ 0.82
SNX1-206ENST00000559389 COQ8BQ96D53 544 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms