RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 A0A1B0GUH1 482 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 C2orf92A0A1B0GVN3 265 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SERTM1A2A2V5 107 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ASPDHA6ND91 283 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 FOXO6A8MYZ6 492 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 C3orf80F5H4A9 247 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 WWP2O00308 870 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SLC28A1O00337 649 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 UBFD1O14562 309 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 TFECO14948 347 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 PGRMC2O15173 223 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 RGS14O43566 566 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 PCDH7O60245 1069 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 NME2P1O60361 137 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 MAN1A2O60476 641 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 PRKRAO75569 313 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 ERAL1O75616 437 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 BCAS2O75934 225 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 RSL1D1O76021 490 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 NEURL1O76050 574 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SNUPNO95149 360 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 UNC5CO95185 931 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 DDAH2O95865 285 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 P04436 131 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ATP1B1P05026 303 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ANXA4P09525 319 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 NEFHP12036 1026 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 CPMP14384 443 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 DRD2P14416 443 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 PORP16435 677 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 CSNK2A2P19784 350 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 NT5EP21589 574 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 NME2P22392 152 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ERVK-8P63133 956 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 RPP38P78345 283 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 IGLV3-21P80748 117 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 BTKQ06187 659 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ZNF763Q0D2J5 394 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 GALNT1Q10472 559 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 SPRED3Q2MJR0 410 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 CEP85LQ5SZL2 805 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SWT1Q5T5J6 900 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 SLC48A1Q6P1K1 146 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 MTFR2Q6P444 385 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 GALNT18Q6P9A2 607 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 PAOXQ6QHF9 649 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 IL20RBQ6UXL0 311 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 BNC2Q6ZN30 1099 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 RNF111Q6ZNA4 994 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 RTL4Q6ZR62 310 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 GK5Q6ZS86 529 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TRIM46Q7Z4K8 759 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 TRABD2AQ86V40 505 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 KIRREL3Q8IZU9 778 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TAGAPQ8N103 731 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 LRRC25Q8N386 305 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 VWA5B2Q8N398 1253 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SLC15A4Q8N697 577 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 GOLM1Q8NBJ4 401 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 POGLUT1Q8NBL1 392 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 MDS2Q8NDY4 140 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 OR7G1Q8NGA0 311 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 FAM76AQ8TAV0 307 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TCP10LQ8TDR4 215 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ZNF721Q8TF20 911 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 AGAP11Q8TF27 550 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SSC4DQ8WTU2 575 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 CHTF18Q8WVB6 975 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TM4SF18Q96CE8 201 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 KLHL29Q96CT2 875 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SCMH1Q96GD3 660 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 METTL2AQ96IZ6 378 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 MAGED4Q96JG8 741 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 FAM111AQ96PZ2 611 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TAAR6Q96RI8 345 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 GAL3ST4Q96RP7 486 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 RASL10BQ96S79 203 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 NPAS2Q99743 824 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 CCT7Q99832 543 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SLX1AQ9BQ83 275 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TMEM109Q9BVC6 243 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 KRTAP3-3Q9BYR6 98 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 KRTAP3-2Q9BYR7 98 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SHCBP1LQ9BZQ2 653 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 BRINP2Q9C0B6 783 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 MIEF1Q9NQG6 463 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SACM1LQ9NTJ5 587 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 TEX10Q9NXF1 929 aaPredicted RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 LGALS13Q9UHV8 139 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 MCM8Q9UJA3 840 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ZNF225Q9UK10 706 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 RAB21Q9UL25 225 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 EMCNQ9ULC0 261 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ERVK-19Q9WJR5 959 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 ENTPD4Q9Y227 616 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 SLC5A6Q9Y289 635 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 DLGAP4Q9Y2H0 992 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 WBP11Q9Y2W2 641 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 TIMM22Q9Y584 194 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms