RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 HIST1H2AJQ99878 128 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 ADAM2Q99965 735 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 H2AFJQ9BTM1 129 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 KATNB1Q9BVA0 655 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 TMED9Q9BVK6 235 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 ATG10Q9H0Y0 220 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 LIN7BQ9HAP6 207 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 FOLH1BQ9HBA9 442 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 FAM105AQ9NUU6 356 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 ACSL6Q9UKU0 697 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 SCML1Q9UN30 329 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 PPIEQ9UNP9 301 aaKnown RBP4.83□□□□□ -1.64
HMG20A-204ENST00000558288 CORO2BQ9UQ03 480 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 SLC22A14Q9Y267 594 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 C5orf42Q9H799 3197 aa4.83□□□□□ -1.64
HMG20A-204ENST00000558288 LOC105369274A0A096LPK9 316 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 GTPBP1O00178 669 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SLC9A3R1O14745 358 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 YY2O15391 372 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 HRGP04196 525 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TPOP07202 933 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SYPP08247 313 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ITGB7P26010 798 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PCGF2P35227 344 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 XKP51811 444 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SMSP52788 366 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ATP12AP54707 1039 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 WNT3P56703 355 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 RAB8AP61006 207 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ADAM15Q13444 863 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 MEDAGQ5VYS4 303 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 FRG2Q64ET8 278 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 MZT2AQ6P582 158 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 B3GLCTQ6Y288 498 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF730Q6ZMV8 503 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SHFQ7M4L6 423 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 RBFAQ8N0V3 343 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 OR4N4Q8N0Y3 316 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF366Q8N895 744 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PROKR2Q8NFJ6 384 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TM9SF4Q92544 642 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 UFD1Q92890 307 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 RBPMSQ93062 196 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 FATE1Q969F0 183 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 FBXO32Q969P5 355 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 GPR137Q96N19 417 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 FAM193BQ96PV7 902 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 FRG2BQ96QU4 278 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 MGME1Q9BQP7 344 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 MARVELD1Q9BSK0 173 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TMEM43Q9BTV4 400 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 C2orf49Q9BVC5 232 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 P2RY12Q9H244 342 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 BEX1Q9HBH7 125 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 NUDT15Q9NV35 164 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 EXTL2Q9UBQ6 330 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ADAM30Q9UKF2 790 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 LSM2Q9Y333 95 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PRKAB1Q9Y478 270 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PCDHGB7Q9Y5F8 929 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SESN1Q9Y6P5 492 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TRBC2A0A5B9 178 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 E9PQ18 207 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 F8W810 466 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 LINC01565O15544 149 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 CHP2O43745 196 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SSNA1O43805 119 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 AKAP8O43823 692 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 RAB36O95755 333 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 IFNW1P05000 195 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PIPP12273 146 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ITGALP20701 1170 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TACR2P21452 398 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 KELP23276 732 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PPIBP23284 216 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ETV5P41161 510 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 PXNP49023 591 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 STK19P49842 368 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ETV1P50549 477 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 MAP2K6P52564 334 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ERVK-21P61565 698 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 CHIT1Q13231 466 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TSTA3Q13630 321 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 COL28A1Q2UY09 1125 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF628Q5EBL2 1059 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 CCNJQ5T5M9 372 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 TMEM81Q6P7N7 255 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF852Q6ZMS4 543 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 RASSF6Q6ZTQ3 369 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 MSANTD1Q6ZTZ1 278 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 UBE2R2Q712K3 238 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 NPAS3Q8IXF0 933 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ZNF683Q8IZ20 524 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 SRFBP1Q8NEF9 429 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 BEST4Q8NFU0 473 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 OR6K2Q8NGY2 324 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 GEMIN6Q8WXD5 167 aaKnown RBP4.82□□□□□ -1.64
HMG20A-204ENST00000558288 ST8SIA2Q92186 375 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 FBXW5Q969U6 566 aa4.82□□□□□ -1.64
HMG20A-204ENST00000558288 CREB3L1Q96BA8 519 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms