RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ACSS1Q9NUB1 689 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PIM2Q9P1W9 311 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PTCH2Q9Y6C5 1203 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CPED1A4D0V7 1026 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ACSM4P0C7M7 580 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MEOX2P50222 304 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SYT6Q5T7P8 510 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 DNAJC22Q8N4W6 341 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 GIMAP1Q8WWP7 306 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PITHD1Q9GZP4 211 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM39AQ9NV64 488 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 LYARQ9NX58 379 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TNFRSF10BO14763 440 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ARPC1BO15143 372 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SURF4O15260 269 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SERPINA7P05543 415 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 C19orf57Q0VDD7 668 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF551Q7Z340 670 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 OR52E2Q8NGJ4 325 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SFT2D1Q8WV19 159 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CD244Q9BZW8 370 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MIOXQ9UGB7 285 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 KLK4Q9Y5K2 254 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ALPK2Q86TB3 2170 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF736B4DX44 427 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SOX14O95416 240 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SELENOWP63302 87 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MS4A15Q8N5U1 240 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SUSD6Q92537 303 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 EIF2B3Q9NR50 452 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MRTO4Q9UKD2 239 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MCIDASD6RGH6 385 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CD163Q86VB7 1156 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 IL31RAQ8NI17 732 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 THAP4Q8WY91 577 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 HMCESQ96FZ2 354 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ACKR4Q9NPB9 350 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLCO3A1Q9UIG8 710 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C14orf166Q9Y224 244 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PNPLA6Q8IY17 1366 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C17orf102A2RUQ5 167 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OPN1SWP03999 348 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PPP3CBP16298 524 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RFC2P35250 354 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 NKX6-1P78426 367 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ZNHIT3Q15649 155 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GGNBP1Q5YKI7 109 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 KDM8Q8N371 416 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PXT1Q8NFP0 134 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 YIPF5Q969M3 257 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PNO1Q9NRX1 252 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TBL1XO60907 577 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 GPX5O75715 221 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TTRP02766 147 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLURP2P0DP57 97 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 MECP2P51608 486 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RAP2BP61225 183 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR56A3Q8NH54 315 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SMIM3Q9BZL3 60 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC6A20Q9NP91 592 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SPG21Q9NZD8 308 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RASD1Q9Y272 281 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 WASH3PC4AMC7 463 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 J3KR12 359 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ARL6IP5O75915 188 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 STK17BO94768 372 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CHRNEQ04844 493 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SPANXN4Q5MJ08 99 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 C6orf132Q5T0Z8 1188 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SORT1Q99523 831 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CADP27708 2225 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 CREBBPQ92793 2442 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ARAP1Q96P48 1450 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 I6L893 689 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 AQP7O14520 342 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 FGF10O15520 208 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 B4GALT5O43286 388 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PPP1R11O60927 126 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RENP00797 406 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OC90Q02509 493 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 POMZP3Q6PJE2 187 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SAMD7Q7Z3H4 446 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RBFAQ8N0V3 343 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR7D4Q8NG98 312 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ASTN1O14525 1302 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 DCDC2BA2VCK2 349 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 OR2C1O95371 312 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 MAS1P04201 325 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 ATP4BP51164 291 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 TLE2Q04725 743 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 BOP1Q14137 746 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 PTGES3Q15185 160 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LRRC26Q2I0M4 334 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 VARS2Q5ST30 1063 aaKnown RBP3.53□□□□□ -1.84
ATXN3-248ENST00000558190 RNLSQ5VYX0 342 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 AGMOQ6ZNB7 445 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 SLC30A8Q8IWU4 369 aa3.53□□□□□ -1.84
ATXN3-248ENST00000558190 LSMEM2Q8N112 164 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms