RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 DDAH2O95865 285 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 LBPP18428 481 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 EPHA3P29320 983 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 CLCN2P51788 898 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 ERVK-8P63133 956 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 CRB2Q5IJ48 1285 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 LARP4Q71RC2 724 aaKnown RBP eCLIP23.82■■□□□ 1.4
SMAD6-202ENST00000557916 LRRC34Q8IZ02 419 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 SAMD14Q8IZD0 417 aaPredicted RBP23.82■■□□□ 1.4
SMAD6-202ENST00000557916 SLC2A12Q8TD20 617 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 DOK4Q8TEW6 326 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 VMP1Q96GC9 406 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF681Q96N22 645 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 WDR55Q9H6Y2 383 aaPredicted RBP23.82■■□□□ 1.4
SMAD6-202ENST00000557916 SLC35C2Q9NQQ7 365 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 NOP53Q9NZM5 478 aaKnown RBP23.82■■□□□ 1.4
SMAD6-202ENST00000557916 ENTPD4Q9Y227 616 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 PCDHGB7Q9Y5F8 929 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 USH1CQ9Y6N9 552 aa23.82■■□□□ 1.4
SMAD6-202ENST00000557916 CHD6Q8TD26 2715 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 GOLGA8QA0A0J9YX86 632 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 GOLGA8OA6NCC3 632 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 GOLGA8NF8WBI6 632 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF195O14628 629 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 PDGFAP04085 211 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 SPRED3Q2MJR0 410 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 LACTB2Q53H82 288 aaPredicted RBP23.81■■□□□ 1.4
SMAD6-202ENST00000557916 MAVSQ7Z434 540 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 LRRC25Q8N386 305 aaPredicted RBP23.81■■□□□ 1.4
SMAD6-202ENST00000557916 OR1N1Q8NGS0 311 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 SENP5Q96HI0 755 aaPredicted RBP23.81■■□□□ 1.4
SMAD6-202ENST00000557916 SLC25A18Q9H1K4 315 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 REEP4Q9H6H4 257 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 CXorf21Q9HAI6 301 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 ASIC5Q9NY37 505 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 TAS2R7Q9NYW3 318 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF451Q9Y4E5 1061 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 DOCK10Q96BY6 2186 aa23.81■■□□□ 1.4
SMAD6-202ENST00000557916 TRBV11-1A0A0K0K1C0 115 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 TCP11X1B4DZS4 312 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 G6PDP11413 515 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 NT5EP21589 574 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 DUSP2Q05923 314 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF267Q14586 743 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-202ENST00000557916 PTGR1Q14914 329 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 PRSS53Q2L4Q9 553 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 B3GNTL1Q67FW5 361 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-202ENST00000557916 H3F3CQ6NXT2 135 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ISLR2Q6UXK2 745 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ASB18Q6ZVZ8 466 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 GALNT12Q8IXK2 581 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF321PQ8N8H1 164 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF721Q8TF20 911 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ART5Q96L15 291 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 BBC3Q96PG8 261 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-202ENST00000557916 DEFB126Q9BYW3 111 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 SEMA4CQ9C0C4 833 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 COPS7AQ9UBW8 275 aa23.8■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF223Q9UK11 482 aaPredicted RBP23.8■■□□□ 1.4
SMAD6-202ENST00000557916 HRKO00198 91 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 ATP1B1P05026 303 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 SOX11P35716 441 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 SLC9B1Q4ZJI4 515 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 C6orf163Q5TEZ5 329 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 LINC00696Q6ZRV3 163 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 CCDC116Q8IYX3 515 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 FBXL20Q96IG2 436 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 BBS4Q96RK4 519 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 CNPPD1Q9BV87 410 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 TEKT2Q9UIF3 430 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 ERVK-19Q9WJR5 959 aa23.79■■□□□ 1.4
SMAD6-202ENST00000557916 DIO3P55073 304 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 GUCY1A3Q02108 690 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 CEBPEQ15744 281 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 FCRLBQ6BAA4 426 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 NXNQ6DKJ4 435 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 OGFOD2Q6N063 350 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 ANKRD26P1Q6NSI1 321 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 R3HCC1LQ7Z5L2 792 aaKnown RBP23.78■■□□□ 1.4
SMAD6-202ENST00000557916 SLC5A8Q8N695 610 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 SLC39A7Q92504 469 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 PPCDCQ96CD2 204 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF764Q96H86 408 aaPredicted RBP23.78■■□□□ 1.4
SMAD6-202ENST00000557916 MAELQ96JY0 434 aaKnown RBP23.78■■□□□ 1.4
SMAD6-202ENST00000557916 ZNF354BQ96LW1 612 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 ZBTB20Q9HC78 741 aaPredicted RBP23.78■■□□□ 1.4
SMAD6-202ENST00000557916 ATRXP46100 2492 aa23.78■■□□□ 1.4
SMAD6-202ENST00000557916 TBX19O60806 448 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 DIAPH2O60879 1101 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 ZFAND5O76080 213 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 IGKV3-11P04433 115 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 MPIP34949 423 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 HPCAL1P37235 193 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 MFAP5Q13361 173 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 ABHD17BQ5VST6 288 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 EPGNQ6UW88 154 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 HSDL2Q6YN16 418 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 ACTRT2Q8TDY3 377 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 MTERF3Q96E29 417 aa23.77■■□□□ 1.4
SMAD6-202ENST00000557916 LMF1Q96S06 567 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms