RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 WWTR1Q9GZV5 400 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 SLC6A15Q9H2J7 730 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 DPH5Q9H2P9 285 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 LIME1Q9H400 295 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 DMRT3Q9NQL9 472 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 CCM2LQ9NUG4 571 aaPredicted RBP14.66□□□□□ -0.06
SCFD1-224ENST00000557713 RNF14Q9UBS8 474 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ERVK-19Q9WJR5 959 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 ASB4Q9Y574 426 aa14.66□□□□□ -0.06
SCFD1-224ENST00000557713 NCKAP5O14513 1909 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 IQANK1A0A1B0GTG1 560 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 ANKRD33BA6NCL7 494 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 OR6C76A6NM76 312 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 HSPB2A8KAH6 182 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 SUPT3HB4E1H0 165 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 DIAPH2O60879 1101 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 TRIM3O75382 744 aaPredicted RBP14.65□□□□□ -0.06
SCFD1-224ENST00000557713 SUPT3HO75486 399 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 PTX3P26022 381 aaPredicted RBP14.65□□□□□ -0.06
SCFD1-224ENST00000557713 CRABP2P29373 138 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 GALNSP34059 522 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 BSGP35613 385 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 KIR2DL3P43628 341 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 RAP1GDS1P52306 607 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 CALCOCO2Q13137 446 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 DDX39BQ13838 428 aaKnown RBP14.65□□□□□ -0.06
SCFD1-224ENST00000557713 EBPQ15125 230 aaKnown RBP14.65□□□□□ -0.06
SCFD1-224ENST00000557713 HSPB2Q16082 182 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 NTRK2Q16620 822 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 RNF111Q6ZNA4 994 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 RAPH1Q70E73 1250 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 SLC29A4Q7RTT9 530 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 CTAGE3PQ8IX95 158 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 TEX9Q8N6V9 391 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 ZNF441Q8N8Z8 693 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 POM121Q96HA1 1249 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 MTERF1Q99551 399 aaKnown RBP14.65□□□□□ -0.06
SCFD1-224ENST00000557713 PELOQ9BRX2 385 aaKnown RBP14.65□□□□□ -0.06
SCFD1-224ENST00000557713 RASSF1Q9NS23 344 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 GRHL1Q9NZI5 618 aa14.65□□□□□ -0.06
SCFD1-224ENST00000557713 ZNF469Q96JG9 3925 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 A0A1W2PR48 441 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 FAM187AA6NFU0 413 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 AHRRA9YTQ3 701 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 EEDO75530 441 aaKnown RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 LRATO95237 230 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 EPPINO95925 133 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 LTA4HP09960 611 aaKnown RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 CEACAM8P31997 349 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 PEX19P40855 299 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 BUD31P41223 144 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 TRPC1P48995 793 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 RPS13P62277 151 aaKnown RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 KBTBD12Q3ZCT8 623 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 LIPJQ5W064 366 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 POMZP3Q6PJE2 187 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 TBC1D1Q86TI0 1168 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 TGIF2LYQ8IUE0 185 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 PPM1NQ8N819 430 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 RELL2Q8NC24 303 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 NAXEQ8NCW5 288 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 RIT1Q92963 219 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 UCN3Q969E3 161 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 NXNL1Q96CM4 212 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 JSRP1Q96MG2 331 aaPredicted RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 GAL3ST4Q96RP7 486 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 SH3GL2Q99962 352 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 GPATCH1Q9BRR8 931 aaKnown RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 CENPKQ9BS16 269 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 DDX31Q9H8H2 851 aaKnown RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 LYARQ9NX58 379 aaKnown RBP14.64□□□□□ -0.07
SCFD1-224ENST00000557713 PSD3Q9NYI0 1048 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 CRIM1Q9NZV1 1036 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 ST6GALNAC2Q9UJ37 374 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 PCDHGA11Q9Y5H2 935 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 IKBKGQ9Y6K9 419 aa14.64□□□□□ -0.07
SCFD1-224ENST00000557713 A0A0A6YYD5 115 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 GLOD5A6NK44 160 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 KDM4EB2RXH2 506 aaPredicted RBP14.63□□□□□ -0.07
SCFD1-224ENST00000557713 H0YIV9 168 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 TMPRSS11DO60235 418 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 OR10H2O60403 315 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 SLC35E2P0CK97 266 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 UQCRC1P31930 480 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 CRYZQ08257 329 aaKnown RBP14.63□□□□□ -0.07
SCFD1-224ENST00000557713 DUSP8Q13202 625 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 CUL3Q13618 768 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 FBXL19-AS1Q494R0 122 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 TMEM198Q66K66 360 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 TAGAPQ8N103 731 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 LIX1Q8N485 282 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 TNIP2Q8NFZ5 429 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 RHEBL1Q8TAI7 183 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 TP53INP1Q96A56 240 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 TIMP4Q99727 224 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 DOHHQ9BU89 302 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 CLEC4MQ9H2X3 399 aaPredicted RBP14.63□□□□□ -0.07
SCFD1-224ENST00000557713 ACOT9Q9Y305 439 aa14.63□□□□□ -0.07
SCFD1-224ENST00000557713 ARHGAP21Q5T5U3 1957 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms