RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CCDC177Q9NQR7 707 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 NPDC1Q9NQX5 325 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 SDR39U1Q9NRG7 319 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-230ENST00000557427 AIG1Q9NVV5 245 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 ARL15Q9NXU5 204 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 PTGFRNQ9P2B2 879 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 OPTCQ9UBM4 332 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 BCAP29Q9UHQ4 241 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 TIMM22Q9Y584 194 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
SHMT2-230ENST00000557427 FEZF1A0PJY2 475 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 DYTNA2CJ06 578 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 FBP2O00757 339 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ADAM10O14672 748 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 FFAR3O14843 346 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 GPR42O15529 346 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 WDR47O94967 919 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 VHLP40337 213 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
SHMT2-230ENST00000557427 HSPA7P48741 367 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 TBPL1P62380 186 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ERVK-8P63133 956 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ADAM8P78325 824 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CCNIQ14094 377 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CEBPEQ15744 281 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 MUM1Q2TAK8 710 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 SMU1Q2TAY7 513 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CMPK2Q5EBM0 449 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 COQ5Q5HYK3 327 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ZNF425Q6IV72 752 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 COX15Q7KZN9 410 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CXXC5Q7LFL8 322 aaKnown RBP11.72□□□□□ -0.53
SHMT2-230ENST00000557427 TMEM200AQ86VY9 491 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 SPPL2CQ8IUH8 684 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 FUNDC1Q8IVP5 155 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 OR4F6Q8NGB9 312 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 OR52B6Q8NGF0 335 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 METTL6Q8TCB7 284 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 PYCR2Q96C36 320 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ARSGQ96EG1 525 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CDRT15Q96T59 188 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 NPAS2Q99743 824 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 NTMT1Q9BV86 223 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 IPPKQ9H8X2 491 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 S100A14Q9HCY8 104 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 TMEM184CQ9NVA4 438 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CCDC167Q9P0B6 97 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 CTSFQ9UBX1 484 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 TRPS1Q9UHF7 1281 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 SH2B3Q9UQQ2 575 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 RUVBL1Q9Y265 456 aaKnown RBP11.72□□□□□ -0.53
SHMT2-230ENST00000557427 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 ANGPTL3Q9Y5C1 460 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 GPR45Q9Y5Y3 372 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 PTGDR2Q9Y5Y4 395 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 HCFC1P51610 2035 aa11.72□□□□□ -0.53
SHMT2-230ENST00000557427 NBEAL1Q6ZS30 2694 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 MRASO14807 208 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PRAMEF2O60811 474 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 ONECUT2O95948 504 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 ALBP02768 609 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 ANPEPP15144 967 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 NPPBP16860 134 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 FBLP22087 321 aaKnown RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 ME2P23368 584 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 HMOX2P30519 316 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 HNMTP50135 292 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 AP1S2P56377 157 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PSME3P61289 254 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 OCA2Q04671 838 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PRTGQ2VWP7 1150 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 C18orf21Q32NC0 220 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PDCD4Q53EL6 469 aaKnown RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 FAM219BQ5XKK7 198 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 CAPN13Q6MZZ7 669 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 C8orf82Q6P1X6 216 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PAOXQ6QHF9 649 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 LRRC74BQ6ZQY2 392 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 LRRC70Q7Z2Q7 622 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 C17orf64Q86WR6 236 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 BRIX1Q8TDN6 353 aaKnown RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 NINJ1Q92982 152 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 ATP6V1E2Q96A05 226 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 SDCCAG3Q96C92 435 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 MMABQ96EY8 250 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-230ENST00000557427 C10orf90Q96M02 699 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 DMRTA2Q96SC8 542 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 PCBD2Q9H0N5 130 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 WDR54Q9H977 334 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 ZNF160Q9HCG1 818 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 CDC14AQ9UNH5 594 aa11.71□□□□□ -0.53
SHMT2-230ENST00000557427 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms