RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	SLC10A1	Q14973	349 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	AP5B1	Q2VPB7	878 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	PRAMEF20	Q5VT98	475 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SLC22A10	Q63ZE4	541 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	HIST2H2AA3	Q6FI13	130 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GRHL2	Q6ISB3	625 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	POMZP3	Q6PJE2	187 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZDHHC24	Q6UX98	284 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	CHSY3	Q70JA7	882 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GPR180	Q86V85	440 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	LRRC25	Q8N386	305 aa	Predicted RBP	10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZNF441	Q8N8Z8	693 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SRFBP1	Q8NEF9	429 aa	Known RBP	10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	OR10G3	Q8NGC4	313 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	STAG3L4	Q8TBR4	150 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	NXNL1	Q96CM4	212 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	CMTM7	Q96FZ5	175 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GPR78	Q96P69	363 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	PHACTR1	Q9C0D0	580 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	LIME1	Q9H400	295 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	RPF2	Q9H7B2	306 aa	Known RBP	10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	DMRT3	Q9NQL9	472 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	NUDT4	Q9NZJ9	180 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	CNOT11	Q9UKZ1	510 aa	Known RBP	10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TSC22D4	Q9Y3Q8	395 aa		10.27	□□□□□ -0.77
HNRNPC-231	ENST00000557336		A0A0A6YYD5	115 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TRGV5	A0A0B4J1U4	118 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	FAM221A	A4D161	298 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GLOD5	A6NK44	160 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	HCN1	O60741	890 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	CTAG2	O75638	210 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	LRAT	O95237	230 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336		P04436	131 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ALOX15	P16050	662 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SPR	P35270	261 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	PIK3CB	P42338	1070 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZFP36L2	P47974	494 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	MAN2A2	P49641	1150 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	HERVK_113	P63132	956 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ERVK-8	P63133	956 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TNFRSF17	Q02223	184 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	EBP	Q15125	230 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	UBAP2	Q5T6F2	1119 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	C1orf185	Q5T7R7	199 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GRTP1	Q5TC63	336 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	FNDC7	Q5VTL7	733 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TMEM64	Q6YI46	380 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ULK2	Q8IYT8	1036 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TEX9	Q8N6V9	391 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	PPM1N	Q8N819	430 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	NAXE	Q8NCW5	288 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SPATA4	Q8NEY3	305 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	OR10Q1	Q8NGQ4	319 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	FBXO25	Q8TCJ0	367 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	KCTD4	Q8WVF5	259 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	CDKL2	Q92772	493 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TANK	Q92844	425 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	UBE2E3	Q969T4	207 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	RGMA	Q96B86	450 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SPACA9	Q96E40	222 aa	Predicted RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	DGAT2	Q96PD7	388 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	MTERF1	Q99551	399 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZNF559	Q9BR84	538 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ERVK-6	Q9BXR3	956 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SLC6A15	Q9H2J7	730 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	DDX31	Q9H8H2	851 aa	Known RBP	10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GRPEL1	Q9HAV7	217 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZFP64	Q9NPA5	681 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ACKR4	Q9NPB9	350 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZNF358	Q9NW07	568 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	OPTC	Q9UBM4	332 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	RNF14	Q9UBS8	474 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	COPS7A	Q9UBW8	275 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ACAD8	Q9UKU7	415 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ERVK-19	Q9WJR5	959 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	NIN	Q8N4C6	2090 aa		10.26	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SUPT3H	B4E1H0	165 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	PGRMC2	O15173	223 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	WDR1	O75083	606 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	TRIM3	O75382	744 aa	Predicted RBP	10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SUPT3H	O75486	399 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GPR75	O95800	540 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	GSTA2	P09210	222 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	LTA4H	P09960	611 aa	Known RBP	10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SERPINB1	P30740	379 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SOX18	P35713	384 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	PAFAH1B1	P43034	410 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	NEK2	P51955	445 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ART1	P52961	327 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	IST1	P53990	364 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	WNT3	P56703	355 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	RPS13	P62277	151 aa	Known RBP	10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	DDX39B	Q13838	428 aa	Known RBP	10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	ZNF267	Q14586	743 aa	Predicted RBP	10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SETDB1	Q15047	1291 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	NTRK2	Q16620	822 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	SPRED3	Q2MJR0	410 aa		10.25	□□□□□ -0.77
HNRNPC-231	ENST00000557336	RIPPLY2	Q5TAB7	128 aa		10.25	□□□□□ -0.77

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