RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SLC17A6Q9P2U8 582 aa11.43□□□□□ -0.58
PSEN1-221ENST00000557293 COPS7AQ9UBW8 275 aa11.43□□□□□ -0.58
PSEN1-221ENST00000557293 NDRG3Q9UGV2 375 aa11.43□□□□□ -0.58
PSEN1-221ENST00000557293 ZKSCAN5Q9Y2L8 839 aa11.43□□□□□ -0.58
PSEN1-221ENST00000557293 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
PSEN1-221ENST00000557293 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 ANKDD1BA6NHY2 528 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 TNFSF13O75888 250 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 GNAZP19086 355 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 CD22P20273 847 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 CRYGSP22914 178 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
PSEN1-221ENST00000557293 RPL21P46778 160 aaKnown RBP11.42□□□□□ -0.58
PSEN1-221ENST00000557293 SLC37A1P57057 533 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 FBXW4P57775 412 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 CDKL1Q00532 357 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 TNK1Q13470 666 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 RCN2Q14257 317 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 EBPQ15125 230 aaKnown RBP11.42□□□□□ -0.58
PSEN1-221ENST00000557293 TBCELQ5QJ74 424 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 HEPHL1Q6MZM0 1159 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 TTC27Q6P3X3 843 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 YRDCQ86U90 279 aaKnown RBP11.42□□□□□ -0.58
PSEN1-221ENST00000557293 CNTN4Q8IWV2 1026 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 RNF10Q8N5U6 811 aaKnown RBP11.42□□□□□ -0.58
PSEN1-221ENST00000557293 BBOF1Q8ND07 529 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 PIK3IP1Q96FE7 263 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 RILPQ96NA2 401 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 WWTR1Q9GZV5 400 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 ZNF701Q9NV72 531 aaPredicted RBP11.42□□□□□ -0.58
PSEN1-221ENST00000557293 KLHL28Q9NXS3 571 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 VWA7Q9Y334 891 aa11.42□□□□□ -0.58
PSEN1-221ENST00000557293 ROS1P08922 2347 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 A0A087X1B8 175 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 SNPHO15079 494 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 TAPBPO15533 448 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 WDR47O94967 919 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 SCELO95171 688 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 SNX4O95219 450 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 KRT14P02533 472 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 FGGP02679 453 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 PTPN6P29350 595 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 CASP3P42574 277 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 MSH2P43246 934 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 NR1H2P55055 460 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 PDAP1Q13442 181 aaKnown RBP11.41□□□□□ -0.58
PSEN1-221ENST00000557293 CRYMQ14894 314 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 TIGD3Q6B0B8 471 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 PODNL1Q6PEZ8 512 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-221ENST00000557293 GALNT7Q86SF2 657 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 GCNT2Q8N0V5 402 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 KRT78Q8N1N4 520 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 NAT8LQ8N9F0 302 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 MAPK1IP1LQ8NDC0 245 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 FAM83FQ8NEG4 500 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-221ENST00000557293 WNT2BQ93097 391 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 RHBDF1Q96CC6 855 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 CTHRC1Q96CG8 243 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 ZFP3Q96NJ6 502 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 DGAT2Q96PD7 388 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 TBCDQ9BTW9 1192 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 PITHD1Q9GZP4 211 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-221ENST00000557293 PIGMQ9H3S5 423 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 TSPY26PQ9H489 355 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 COPS7BQ9H9Q2 264 aaPredicted RBP11.41□□□□□ -0.58
PSEN1-221ENST00000557293 RYDENQ9NUL5 291 aaKnown RBP11.41□□□□□ -0.58
PSEN1-221ENST00000557293 WWOXQ9NZC7 414 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 CLCF1Q9UBD9 225 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 ADGRE2Q9UHX3 823 aa11.41□□□□□ -0.58
PSEN1-221ENST00000557293 NPEPPSL1A6NEC2 478 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 ACTL6AO96019 429 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 F12P00748 615 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-221ENST00000557293 CYP4B1P13584 511 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 CPN2P22792 545 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 CCKARP32238 428 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 CPA2P48052 419 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 HERVK_113P63132 956 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 ERVK-8P63133 956 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 DOC2AQ14183 400 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 RCAN2Q14206 197 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 ZNF267Q14586 743 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-221ENST00000557293 TEDDM1Q5T9Z0 273 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 DESI1Q6ICB0 168 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 C20orf204Q6ZNR8 217 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 HIPK1Q86Z02 1210 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 IGDCC3Q8IVU1 814 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 TMEM158Q8WZ71 300 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 ANKRD7Q92527 254 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 STARD4Q96DR4 205 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 WDR34Q96EX3 536 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 RBM18Q96H35 190 aaKnown RBP11.4□□□□□ -0.58
PSEN1-221ENST00000557293 TMEM41AQ96HV5 264 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 GAL3ST4Q96RP7 486 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 SECISBP2Q96T21 854 aaKnown RBP11.4□□□□□ -0.58
PSEN1-221ENST00000557293 TM9SF2Q99805 663 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 ERVK-6Q9BXR3 956 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 MS4A8Q9BY19 250 aa11.4□□□□□ -0.58
PSEN1-221ENST00000557293 TEX10Q9NXF1 929 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-221ENST00000557293 PACSIN3Q9UKS6 424 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms