RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SCML4Q8N228 414 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 WFIKKN2Q8TEU8 576 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 DEDD2Q8WXF8 326 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 WDR26Q9H7D7 661 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SLC17A7Q9P2U7 560 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ADAMTS13Q76LX8 1427 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 GGT3PA6NGU5 568 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 GGT2P36268 569 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SP2Q02086 613 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 DUSP7Q16829 419 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 OR2T35Q8NGX2 323 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 GRHL3Q8TE85 626 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 NICN1Q9BSH3 213 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 RPF2Q9H7B2 306 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CERS4Q9HA82 394 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ADAP2Q9NPF8 381 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 OXSMQ9NWU1 459 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZMAT5Q9UDW3 170 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MTERF1Q99551 399 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CD300AQ9UGN4 299 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ARFGEF3Q5TH69 2177 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 AGRPO00253 132 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SYN3O14994 580 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ADAM12O43184 909 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 H2BFMP0C1H6 154 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 NOMO2Q5JPE7 1267 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 DPY19L2P1Q6NXN4 242 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 NOXRED1Q6NXP6 359 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SERPINA12Q8IW75 414 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TTPALQ9BTX7 342 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PPIL3Q9H2H8 161 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CHRNA9Q9UGM1 479 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 GPR160Q9UJ42 338 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CD48P09326 243 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 MMP8P22894 467 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FOXO4P98177 505 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 IL10RBQ08334 325 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 GALEQ14376 348 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 OTOP1Q7RTM1 612 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 OR9A2Q8NGT5 310 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 KIF1AQ12756 1690 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 HNRNPDQ14103 355 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CMC1Q7Z7K0 106 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FAM129CQ86XR2 697 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PCDHGA7Q9Y5G6 932 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CADP27708 2225 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 AOC2O75106 756 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TUSC3Q13454 348 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 UGT8Q16880 541 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TMPRSS12Q86WS5 348 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 NRSN1Q8IZ57 195 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TRMT10AQ8TBZ6 339 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TAAR1Q96RJ0 339 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TMPRSS5Q9H3S3 457 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 UTS2RQ9UKP6 389 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FAM96BQ9Y3D0 163 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SPP1P10451 314 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 HLA-DOBP13765 273 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 UGT2B7P16662 529 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 EIF2DP41214 584 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 HLFQ16534 295 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 HAPLN3Q96S86 360 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 DUSP22Q9NRW4 184 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SLC6A5Q9Y345 797 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 SPATA31A3Q5VYP0 1347 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PCDH17O14917 1159 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 GLUD1P00367 558 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PKLRP30613 574 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 EIF4HQ15056 248 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ATP6AP1Q15904 470 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ESPNLQ6ZVH7 1005 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ANKS1BQ7Z6G8 1248 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ANKRD23Q86SG2 305 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 FAM58AQ8N1B3 248 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 VWA5B2Q8N398 1253 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 OR1S1Q8NH92 325 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PREBQ9HCU5 417 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CLEC4EQ9ULY5 219 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 A8MX80 341 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 RNASEH2AO75792 299 aaKnown RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 KCNK2O95069 426 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 RNF4P78317 190 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 COTL1Q14019 142 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 WSCD1Q658N2 575 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM74Q96NL1 305 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 TRBV2A0A0J9YWF9 115 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 NDUFS4O43181 175 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 GLSO94925 669 aaPredicted RBP8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF30P17039 623 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 HSPA7P48741 367 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 DGKQP52824 942 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 MLLT10P55197 1068 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CDK6Q00534 326 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF763Q0D2J5 394 aa8.49□□□□□ -1.05
SYNE3-205ENST00000557275 CCBE1Q6UXH8 406 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms