RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 VPS4BO75351 444 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ERAL1O75616 437 aaKnown RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 WISP1O95388 367 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 SERPINE1P05121 402 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 SP1P08047 785 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 IL3P08700 152 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 CD46P15529 392 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 NT5EP21589 574 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ARRB2P32121 409 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ALDH9A1P49189 494 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 HLCSP50747 726 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ABCE1P61221 599 aaKnown RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 MAGOHP61326 146 aaKnown RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ERVK-8P63133 956 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF763Q0D2J5 394 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 C2orf80Q0P641 193 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 MAP4K2Q12851 820 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF267Q14586 743 aaPredicted RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 OR1C1Q15619 314 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 CHI3L2Q15782 390 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 IGFBP7Q16270 282 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 INAQ16352 499 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF766Q5HY98 468 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 HHATQ5VTY9 493 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 SPINK14Q6IE38 97 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 HDXQ7Z353 690 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ATCAYQ86WG3 371 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 DDIASQ8IXT1 998 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 SAMD14Q8IZD0 417 aaPredicted RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 TMEM156Q8N614 296 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF321PQ8N8H1 164 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 MDS2Q8NDY4 140 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 NUBPLQ8TB37 319 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 AGR3Q8TD06 166 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 TWIST2Q8WVJ9 160 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 TLCD1Q96CP7 247 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 KLHL29Q96CT2 875 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF681Q96N22 645 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 BARD1Q99728 777 aaKnown RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 PAIP2Q9BPZ3 127 aaKnown RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 CNPPD1Q9BV87 410 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 EBPLQ9BY08 206 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 CXorf21Q9HAI6 301 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 LRTM1Q9HBL6 345 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 PFDN4Q9NQP4 134 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 AGPAT4Q9NRZ5 378 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ASF1BQ9NVP2 202 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ANKRD10Q9NXR5 420 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 EHD3Q9NZN3 535 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 HEY2Q9UBP5 337 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 UTS2RQ9UKP6 389 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 VPS4AQ9UN37 437 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 ERVK-19Q9WJR5 959 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.93□□□□□ -0.82
LINC00239-201ENST00000556973 CROCCQ5TZA2 2017 aa9.93□□□□□ -0.82
LINC00239-201ENST00000556973 A0A1W2PS29 197 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 TMEM120BA0PK00 339 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 HRKO00198 91 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 OR2J2O76002 312 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 NEURL1O76050 574 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 RASAL1O95294 804 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 HSPA4LO95757 839 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 ATP1B1P05026 303 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 H2AFXP16104 143 aaPredicted RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 DDCP20711 480 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 FEN1P39748 380 aaKnown RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 SLC1A6P48664 564 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 SSR4P51571 173 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 HK2P52789 917 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 SLC37A1P57057 533 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 KCNC4Q03721 635 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 FUT7Q11130 342 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 STX3Q13277 289 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 MPEG1Q2M385 716 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 PRICKLE4Q2TBC4 344 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF750Q32MQ0 723 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 RFTN2Q52LD8 501 aaPredicted RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 C6orf163Q5TEZ5 329 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 AGBL2Q5U5Z8 902 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 SLC25A25Q6KCM7 469 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 RNF111Q6ZNA4 994 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 IKBIPQ70UQ0 350 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 SLC29A4Q7RTT9 530 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 GALNT12Q8IXK2 581 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 GPALPP1Q8IXQ4 340 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 CCDC116Q8IYX3 515 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 KIRREL3Q8IZU9 778 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 MMP21Q8N119 569 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 ANKRD42Q8N9B4 389 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 GALNT11Q8NCW6 608 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 OR7G1Q8NGA0 311 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 OR2T11Q8NH01 316 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 DNAJB8Q8NHS0 232 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 GRHL3Q8TE85 626 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 C19orf60Q96EN9 201 aa9.92□□□□□ -0.82
LINC00239-201ENST00000556973 CNRIP1Q96F85 164 aaPredicted RBP9.92□□□□□ -0.82
LINC00239-201ENST00000556973 SCMH1Q96GD3 660 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms