RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TBCELQ5QJ74 424 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 DCST1Q5T197 706 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 VASNQ6EMK4 673 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CXXC5Q7LFL8 322 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SLC29A4Q7RTT9 530 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 DND1Q8IYX4 353 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 NKAPQ8N5F7 415 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SNX31Q8N9S9 440 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 C9orf106Q8NAJ2 232 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SPATA3Q8NHX4 192 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 MBD3L2Q8NHZ7 208 aaPredicted RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 SMPDL3BQ92485 455 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 ESAMQ96AP7 390 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 PTCD3Q96EY7 689 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CFAP36Q96G28 342 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 WDYHV1Q96HA8 205 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 FBXL20Q96IG2 436 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 Q96MF0 132 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 RILPQ96NA2 401 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 GNRHR2Q96P88 292 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 KRT12Q99456 494 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 TMEM79Q9BSE2 394 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 NAT9Q9BTE0 207 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 TBCDQ9BTW9 1192 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 RBM24Q9BX46 236 aaKnown RBP8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 ERVK-6Q9BXR3 956 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CAPS2Q9BXY5 557 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 ROGDIQ9GZN7 287 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 WWTR1Q9GZV5 400 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 UBQLN3Q9H347 655 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 DNAJC11Q9NVH1 559 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 GALNT8Q9NY28 637 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 WWOXQ9NZC7 414 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 CTNNAL1Q9UBT7 734 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 ERVK-19Q9WJR5 959 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
HNRNPC-227ENST00000556897 ROS1P08922 2347 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 FAM95CA0A1B0GW59 222 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TRIM64A6NGJ6 449 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TRIM64BA6NI03 449 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 INAFM1C9JVW0 142 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SAP18O00422 153 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SMPD2O60906 423 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ERN1O75460 977 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 PRKRAO75569 313 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SCELO95171 688 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 IL18BPO95998 194 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 HPNP05981 417 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TMIGD3P0DMS9 266 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SSR2P43308 183 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SLCO1A2P46721 670 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 RPL21P46778 160 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 CPA2P48052 419 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 MASP1P48740 699 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 HSPA7P48741 367 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 CDK9P50750 372 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 FBXW4P57775 412 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TAS2R39P59534 338 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ZNF267Q14586 743 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 EBPQ15125 230 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 RPS6KA2Q15349 733 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TGFBIQ15582 683 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 AP5B1Q2VPB7 878 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 NHSL2Q5HYW2 709 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 WIPI1Q5MNZ9 446 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 FNDC7Q5VTL7 733 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 C18orf63Q68DL7 685 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 RNF111Q6ZNA4 994 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SYDE1Q6ZW31 735 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 LUZP2Q86TE4 346 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 PACS2Q86VP3 889 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ZC3HC1Q86WB0 502 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SPATA6LQ8N4H0 392 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 BBOF1Q8ND07 529 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SIMC1Q8NDZ2 872 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SRFBP1Q8NEF9 429 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 C7orf57Q8NEG2 295 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TRIM58Q8NG06 486 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ISL2Q96A47 359 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 WDR34Q96EX3 536 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ART5Q96L15 291 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 EFCAB11Q9BUY7 163 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SORBS1Q9BX66 1292 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 MS4A8Q9BY19 250 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 UGT2B28Q9BY64 529 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 RPF2Q9H7B2 306 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 CNOT10Q9H9A5 744 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 CALHM2Q9HA72 323 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 TEX10Q9NXF1 929 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 ADAM21Q9UKJ8 722 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 CHMP2BQ9UQN3 213 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 C15orf41Q9Y2V0 281 aa8.25□□□□□ -1.09
HNRNPC-227ENST00000556897 WASHC1A8K0Z3 465 aa8.24□□□□□ -1.09
HNRNPC-227ENST00000556897 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
HNRNPC-227ENST00000556897 CES2O00748 559 aa8.24□□□□□ -1.09
HNRNPC-227ENST00000556897 TP53I11O14683 189 aa8.24□□□□□ -1.09
HNRNPC-227ENST00000556897 CASKO14936 926 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms