RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ALOXE3Q9BYJ1 711 aa10.55□□□□□ -0.72
FOXN3-212ENST00000556541 GPN2Q9H9Y4 310 aaPredicted RBP10.55□□□□□ -0.72
FOXN3-212ENST00000556541 NECTIN3Q9NQS3 549 aa10.55□□□□□ -0.72
FOXN3-212ENST00000556541 CCDC167Q9P0B6 97 aa10.55□□□□□ -0.72
FOXN3-212ENST00000556541 SH3BP4Q9P0V3 963 aa10.55□□□□□ -0.72
FOXN3-212ENST00000556541 ZNF639Q9UID6 485 aa10.55□□□□□ -0.72
FOXN3-212ENST00000556541 NDUFAF1Q9Y375 327 aa10.55□□□□□ -0.72
FOXN3-212ENST00000556541 PTRH2Q9Y3E5 179 aaKnown RBP10.55□□□□□ -0.72
FOXN3-212ENST00000556541 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 A0A1W2PRB8 838 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 CCDC154A6NI56 674 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 GLOD5A6NK44 160 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 WASHC1A8K0Z3 465 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 DYRK3O43781 588 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 PLOD3O60568 738 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 LDB3O75112 727 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 ERN1O75460 977 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 PRKRAO75569 313 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 CREG1O75629 220 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 BCAS2O75934 225 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 SOX30O94993 753 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 MNAT1P51948 309 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 AP2B1P63010 937 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 BTG2P78543 158 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 CBX1P83916 185 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 COL9A2Q14055 689 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 UBAP2LQ14157 1087 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 NSDHLQ15738 373 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 ST3GAL2Q16842 350 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 PRSS53Q2L4Q9 553 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 PRICKLE4Q2TBC4 344 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 LRIF1Q5T3J3 769 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 C6orf89Q6UWU4 347 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 HACD2Q6Y1H2 254 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 TRPM8Q7Z2W7 1104 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 ANKRD37Q7Z713 158 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 FITM2Q8N6M3 262 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 MORN4Q8NDC4 146 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 OR7G1Q8NGA0 311 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 KCNE4Q8WWG9 221 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 GFM2Q969S9 779 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 EXOSC8Q96B26 276 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 RBM18Q96H35 190 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 ITCHQ96J02 903 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 DGAT2Q96PD7 388 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 OR52E6Q96RD3 313 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 ZNF700Q9H0M5 742 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 GLIPR2Q9H4G4 154 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 CCDC86Q9H6F5 360 aaKnown RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 SOX17Q9H6I2 414 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 CXorf21Q9HAI6 301 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 SLAMF7Q9NQ25 335 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 SERHLQ9NQF3 203 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 TAS2R9Q9NYW1 312 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 PTGFRNQ9P2B2 879 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 LEF1Q9UJU2 399 aaPredicted RBP10.54□□□□□ -0.72
FOXN3-212ENST00000556541 HS3ST3B1Q9Y662 390 aa10.54□□□□□ -0.72
FOXN3-212ENST00000556541 A0A096LPI6 279 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ASPDHA6ND91 283 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 SAGE2PA6NJ88 616 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 CDK2AP1O14519 115 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 TLX3O43711 291 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ERAL1O75616 437 aaKnown RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 PSMG1O95456 288 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 COX4I1P13073 169 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 HOXB9P17482 250 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 SPINK2P20155 84 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 CAPN3P20807 821 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 MAOAP21397 527 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 F8A1P23610 371 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 PSPHP78330 225 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 MGAT2Q10469 447 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 FUT7Q11130 342 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 CYLC2Q14093 348 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ERV3-1Q14264 604 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 EXT1Q16394 746 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 MAPKAPK3Q16644 382 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 PGS1Q32NB8 556 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ZNF628Q5EBL2 1059 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 OR4F3Q6IEY1 312 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 CPEB2Q7Z5Q1 589 aaKnown RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 PPP1R32Q7Z5V6 425 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 TREML1Q86YW5 311 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 GALNT12Q8IXK2 581 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 SHISA5Q8N114 240 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 OR2L13Q8N349 312 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 OR8K3Q8NH51 312 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 THAP4Q8WY91 577 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 GTF2H4Q92759 462 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 TSLPQ969D9 159 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 UCN3Q969E3 161 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 ROPN1LQ96C74 230 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 FBXL20Q96IG2 436 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 LPAR4Q99677 370 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 WDR77Q9BQA1 342 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-212ENST00000556541 RBCK1Q9BYM8 510 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 SEMA4CQ9C0C4 833 aa10.53□□□□□ -0.72
FOXN3-212ENST00000556541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms