RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PDGFBP01127 241 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-221ENST00000556534 B4GALT1P15291 398 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 KCNK10P57789 538 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 UBXN1Q04323 297 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 ACTN3Q08043 901 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-221ENST00000556534 RUNX3Q13761 415 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 GIT2Q14161 759 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 LASP1Q14847 261 aaKnown RBP3.44□□□□□ -1.86
SCFD1-221ENST00000556534 RNF212Q495C1 297 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 ODF2Q5BJF6 829 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 C1orf189Q5VU69 101 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 TATDN1Q6P1N9 297 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 RNASE8Q8TDE3 154 aaKnown RBP3.44□□□□□ -1.86
SCFD1-221ENST00000556534 OSBPL8Q9BZF1 889 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 TSPYL1Q9H0U9 437 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 IL1RAPL2Q9NP60 686 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 ARMCX1Q9P291 453 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 EXOC6BQ9Y2D4 811 aa3.44□□□□□ -1.86
SCFD1-221ENST00000556534 MCF2LO15068 1137 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 GAS8O95995 478 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 THY1P04216 161 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 TPBGLP0DKB5 382 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 BPIFB3P59826 476 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 P2RY14Q15391 338 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 STX1AQ16623 288 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 SMU1Q2TAY7 513 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 UNC50Q53HI1 259 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 ATAD3CQ5T2N8 411 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 LIPJQ5W064 366 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 TMEM270Q6UE05 265 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 FAM43BQ6ZT52 329 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-221ENST00000556534 PRSS42Q7Z5A4 293 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 PARP8Q8N3A8 854 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 SIDT2Q8NBJ9 832 aaKnown RBP3.43□□□□□ -1.86
SCFD1-221ENST00000556534 SPC24Q8NBT2 197 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 ICA1LQ8NDH6 482 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 BEST4Q8NFU0 473 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 MRAPQ8TCY5 172 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 GLYATL1Q969I3 302 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 ZBP1Q9H171 429 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 DPEP3Q9H4B8 488 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 TEKT2Q9UIF3 430 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 FOXA2Q9Y261 457 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-221ENST00000556534 SLC6A5Q9Y345 797 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
SCFD1-221ENST00000556534 TRAV9-2A0A087WT02 112 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 LRRD1A4D1F6 860 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 RNF212BA8MTL3 300 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 ZNF487B1APH4 448 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 PSMD3O43242 534 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 HTATSF1O43719 755 aaKnown RBP3.42□□□□□ -1.86
SCFD1-221ENST00000556534 FCGR3AP08637 254 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 CYP3A5P20815 502 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 ATP6V1E1P36543 226 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 ALDH3B1P43353 468 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 TKTL1P51854 596 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 YBEYP58557 167 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-221ENST00000556534 GK2Q14410 553 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-221ENST00000556534 MORF4L2Q15014 288 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 AARDQ4LEZ3 155 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 SLC39A12Q504Y0 691 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 EPC2Q52LR7 807 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 IFI44LQ53G44 452 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 STHQ8IWL8 128 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 C10orf53Q8N6V4 93 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 OR6M1Q8NGM8 313 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 OR4L1Q8NH43 312 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 UBTD2Q8WUN7 234 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 MRPL53Q96EL3 112 aaKnown RBP3.42□□□□□ -1.86
SCFD1-221ENST00000556534 C16orf58Q96GQ5 468 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 CAPNS2Q96L46 248 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 CCDC43Q96MW1 224 aaKnown RBP3.42□□□□□ -1.86
SCFD1-221ENST00000556534 ST6GALNAC5Q9BVH7 336 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 ACAT2Q9BWD1 397 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 SLC25A19Q9HC21 320 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 AMBNQ9NP70 447 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 MID1IP1Q9NPA3 183 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 GDF3Q9NR23 364 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 TNFRSF19Q9NS68 423 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 TRPC4Q9UBN4 977 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 MRTO4Q9UKD2 239 aaKnown RBP3.42□□□□□ -1.86
SCFD1-221ENST00000556534 NAALAD2Q9Y3Q0 740 aa3.42□□□□□ -1.86
SCFD1-221ENST00000556534 C5orf51A6NDU8 294 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 A8MU10 97 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 MEI4A8MW99 385 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 C19orf81C9J6K1 198 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 CACNB4O00305 520 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-221ENST00000556534 AKAP3O75969 853 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 TXNDC12O95881 172 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 CTNNB1P35222 781 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 NAAAQ02083 359 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 EMC2Q15006 297 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 ANKRD55Q3KP44 614 aa3.41□□□□□ -1.86
SCFD1-221ENST00000556534 CCBE1Q6UXH8 406 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-221ENST00000556534 RELL2Q8NC24 303 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-221ENST00000556534 KLHL30-AS1Q8NEE0 82 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms