RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SH2D2AQ9NP31 389 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 KCNJ16Q9NPI9 418 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 TNFRSF10DQ9UBN6 386 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 ITGB1BP2Q9UKP3 347 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 PDZD2O15018 2839 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 NR2F6P10588 404 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 POU3F2P20265 443 aaPredicted RBP20.84■□□□□ 0.93
ACTN1-220ENST00000556433 ACVR2AP27037 513 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 MAN2A2P49641 1150 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 SPRED3Q2MJR0 410 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 TECRLQ5HYJ1 363 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 UBAP2Q5T6F2 1119 aaKnown RBP20.84■□□□□ 0.93
ACTN1-220ENST00000556433 PTGR2Q8N8N7 351 aaPredicted RBP20.84■□□□□ 0.93
ACTN1-220ENST00000556433 PAQR8Q8TEZ7 354 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 UCN3Q969E3 161 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 SPACA9Q96E40 222 aaPredicted RBP20.84■□□□□ 0.93
ACTN1-220ENST00000556433 PHF21BQ96EK2 531 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 CDK15Q96Q40 435 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 TREX2Q9BQ50 279 aaPredicted RBP20.84■□□□□ 0.93
ACTN1-220ENST00000556433 EXO5Q9H790 373 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 ZNF358Q9NW07 568 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 ACAD8Q9UKU7 415 aa20.84■□□□□ 0.93
ACTN1-220ENST00000556433 AQP7O14520 342 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 OR7A17O14581 309 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 TOXO94900 526 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 GBAP04062 536 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 CAPN3P20807 821 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 KCNJ2P63252 427 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 PRAMEF20Q5VT98 475 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 NUDT13Q86X67 352 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 OR10Q1Q8NGQ4 319 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 SERPINI1Q99574 410 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 WWTR1Q9GZV5 400 aa20.83■□□□□ 0.93
ACTN1-220ENST00000556433 MTRF1LQ9UGC7 380 aaKnown RBP20.83■□□□□ 0.93
ACTN1-220ENST00000556433 FIGNL2A6NMB9 653 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 PGRMC2O15173 223 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 SUSD5O60279 629 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 AIFM1O95831 613 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 RBP1P09455 135 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 SLC35E2P0CK97 266 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 SERPINB3P29508 390 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 GALNSP34059 522 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 CCNG1P51959 295 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 SLC37A1P57057 533 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 TBL3Q12788 808 aaKnown RBP20.82■□□□□ 0.92
ACTN1-220ENST00000556433 ADGRD1Q6QNK2 874 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 DND1Q8IYX4 353 aaKnown RBP20.82■□□□□ 0.92
ACTN1-220ENST00000556433 FAM13CQ8NE31 585 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 OR10G3Q8NGC4 313 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 OR52B6Q8NGF0 335 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 SLC44A1Q8WWI5 657 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 SARAFQ96BY9 339 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 TTYH2Q9BSA4 534 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 MCCC2Q9HCC0 563 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 ZFP64Q9NPA5 681 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 NPDC1Q9NQX5 325 aaPredicted RBP20.82■□□□□ 0.92
ACTN1-220ENST00000556433 CNIH4Q9P003 139 aa20.82■□□□□ 0.92
ACTN1-220ENST00000556433 BOKQ9UMX3 212 aaPredicted RBP20.82■□□□□ 0.92
ACTN1-220ENST00000556433 POLQO75417 2590 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 TRGV5A0A0B4J1U4 118 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 OR6C76A6NM76 312 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 URI1O94763 535 aaPredicted RBP20.81■□□□□ 0.92
ACTN1-220ENST00000556433 INHBAP08476 426 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 FBXO45P0C2W1 286 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 EBPQ15125 230 aaKnown RBP20.81■□□□□ 0.92
ACTN1-220ENST00000556433 WLSQ5T9L3 541 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 TTC19Q6DKK2 380 aaPredicted RBP20.81■□□□□ 0.92
ACTN1-220ENST00000556433 B3GNT6Q6ZMB0 384 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 RELL1Q8IUW5 271 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 FBXW8Q8N3Y1 598 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 PROK2Q9HC23 129 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 ALKBH4Q9NXW9 302 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 TMCO1Q9UM00 188 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 IKBKGQ9Y6K9 419 aa20.81■□□□□ 0.92
ACTN1-220ENST00000556433 HCN1O60741 890 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 SEMA3DO95025 777 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 ACSL3O95573 720 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 RFPL3SP0C7P2 107 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 GLI4P10075 376 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 IGFBP2P18065 325 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 PIK3R1P27986 724 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 TFF3Q07654 80 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 FRG2Q64ET8 278 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 RTL6Q6ICC9 239 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 OR52E8Q6IFG1 317 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 TAGAPQ8N103 731 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 JSRP1Q96MG2 331 aaPredicted RBP20.8■□□□□ 0.92
ACTN1-220ENST00000556433 FRG2BQ96QU4 278 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 NTMT1Q9BV86 223 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 FUT8Q9BYC5 575 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 CDC42EP4Q9H3Q1 356 aaKnown RBP20.8■□□□□ 0.92
ACTN1-220ENST00000556433 RYDENQ9NUL5 291 aaKnown RBP20.8■□□□□ 0.92
ACTN1-220ENST00000556433 TEX10Q9NXF1 929 aaPredicted RBP20.8■□□□□ 0.92
ACTN1-220ENST00000556433 FAM215AQ9Y5M1 114 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 CHCHD2Q9Y6H1 151 aaPredicted RBP20.8■□□□□ 0.92
ACTN1-220ENST00000556433 INTS1Q8N201 2190 aaKnown RBP20.8■□□□□ 0.92
ACTN1-220ENST00000556433 DCHS2Q6V1P9 2916 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 OTOGQ6ZRI0 2925 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 CCDC168Q8NDH2 2452 aa20.8■□□□□ 0.92
ACTN1-220ENST00000556433 TEP1Q99973 2627 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms