RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CRLF3Q8IUI8 442 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ST13P4Q8IZP2 240 aaPredicted RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 LGI4Q8N135 537 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SVOPQ8N4V2 548 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ZNF321PQ8N8H1 164 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 TEX19Q8NA77 164 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 MORN4Q8NDC4 146 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 OR14A16Q8NHC5 309 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 C16orf78Q8WTQ4 265 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SREK1Q8WXA9 508 aaKnown RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 HAS2Q92819 552 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 DAZLQ92904 295 aaKnown RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 NCLNQ969V3 563 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 PPWD1Q96BP3 646 aaKnown RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 SENP5Q96HI0 755 aaPredicted RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 ZNF681Q96N22 645 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 SORT1Q99523 831 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 RNF32Q9H0A6 362 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 WDR41Q9HAD4 459 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 KCNK13Q9HB14 408 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 PLA2G3Q9NZ20 509 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ANAPC2Q9UJX6 822 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 EXO1Q9UQ84 846 aaKnown RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 DLGAP4Q9Y2H0 992 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.99□□□□□ -0.97
SRP54-210ENST00000556380 CSAG2Q9Y5P2 127 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 LRRK2Q5S007 2527 aa8.99□□□□□ -0.97
SRP54-210ENST00000556380 ARHGAP10A1A4S6 786 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 C1orf226A1L170 272 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 C17orf105B2RV13 164 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 TMEM114B3SHH9 223 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 HRKO00198 91 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 PIP5K1BO14986 540 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 LSM1O15116 133 aaKnown RBP8.98□□□□□ -0.97
SRP54-210ENST00000556380 PRKNO60260 465 aaPredicted RBP8.98□□□□□ -0.97
SRP54-210ENST00000556380 GUCY1B2O75343 617 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 WDPCPO95876 746 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 IFNA16P05015 189 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 IL3P08700 152 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ANXA4P09525 319 aaPredicted RBP8.98□□□□□ -0.97
SRP54-210ENST00000556380 LINC00032P0C843 101 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 DRD2P14416 443 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 TACR1P25103 407 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 GPC1P35052 558 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 SOX18P35713 384 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 SLC1A6P48664 564 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 XKP51811 444 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 MLF1P58340 268 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 TAS2R50P59544 299 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 MGAT2Q10469 447 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 BST1Q10588 318 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 STX3Q13277 289 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 IMPG1Q17R60 797 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 PRSS53Q2L4Q9 553 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ZNF750Q32MQ0 723 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 XKR7Q5GH72 579 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 SPDYAQ5MJ70 313 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 HHATQ5VTY9 493 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 SLC6A19Q695T7 634 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 FAM71E1Q6IPT2 247 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 RPS19BP1Q86WX3 136 aaKnown RBP8.98□□□□□ -0.97
SRP54-210ENST00000556380 ZADH2Q8N4Q0 377 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ZNF781Q8N8C0 355 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ANKRD42Q8N9B4 389 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 CATSPER1Q8NEC5 780 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 OR4K14Q8NGD5 310 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 OR1N1Q8NGS0 311 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 SLC2A12Q8TD20 617 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ZNF721Q8TF20 911 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 TWIST2Q8WVJ9 160 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 TM9SF4Q92544 642 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 PNPLA2Q96AD5 504 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 VMP1Q96GC9 406 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 RBM18Q96H35 190 aaKnown RBP8.98□□□□□ -0.97
SRP54-210ENST00000556380 ATP6V1G3Q96LB4 118 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ZNF354BQ96LW1 612 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 C3orf30Q96M34 536 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 DGAT2Q96PD7 388 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 LRTM1Q9HBL6 345 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 ZNF446Q9NWS9 450 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 C1orf109Q9NX04 203 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 STMN3Q9NZ72 180 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 B3GNT3Q9Y2A9 372 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 WBP11Q9Y2W2 641 aaKnown RBP8.98□□□□□ -0.97
SRP54-210ENST00000556380 CLCA3PQ9Y6N3 262 aa8.98□□□□□ -0.97
SRP54-210ENST00000556380 USP9XQ93008 2570 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 TRBV11-1A0A0K0K1C0 115 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 CDK2AP1O14519 115 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 RGS14O43566 566 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 SNNO75324 88 aaPredicted RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 ZFAND5O76080 213 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 SNUPNO95149 360 aaKnown RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 CLPSP04118 112 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 JUNP05412 331 aaKnown RBP8.97□□□□□ -0.97
SRP54-210ENST00000556380 NEFHP12036 1026 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 CPMP14384 443 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 TNNI3P19429 210 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 S1PR1P21453 382 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 GSTM5P46439 218 aa8.97□□□□□ -0.97
SRP54-210ENST00000556380 TNFSF10P50591 281 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms