RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 FAM90A1Q86YD7 464 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 DSELQ8IZU8 1212 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 CSNK1A1LQ8N752 337 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 ENDOVQ8N8Q3 282 aaKnown RBP4.41□□□□□ -1.7
ATXN3-237ENST00000556274 CCDC63Q8NA47 563 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 ZBTB34Q8NCN2 500 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 FLVCR1-AS1Q8TAF5 88 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PPP1R35Q8TAP8 253 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 ZCCHC10Q8TBK6 192 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PPP4R1Q8TF05 950 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 SLC13A3Q8WWT9 602 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 STARD8Q92502 1023 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 FBXL8Q96CD0 374 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 MTFMTQ96DP5 389 aaKnown RBP4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PHF21BQ96EK2 531 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PDLIM5Q96HC4 596 aaKnown RBP4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PAFAH2Q99487 392 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 GPR22Q99680 433 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 AIF1LQ9BQI0 150 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 MLST8Q9BVC4 326 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PITPNM3Q9BZ71 974 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 FAM129AQ9BZQ8 928 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 B3GNT4Q9C0J1 378 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 DERL2Q9GZP9 239 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 RHBGQ9H310 441 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 CENPHQ9H3R5 247 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 ACTL8Q9H568 366 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 PRORYQ9H606 182 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 CNOT10Q9H9A5 744 aaKnown RBP4.41□□□□□ -1.7
ATXN3-237ENST00000556274 POPDC3Q9HBV1 291 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 ZNF304Q9HCX3 659 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 ZNF71Q9NQZ8 489 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-237ENST00000556274 SNX15Q9NRS6 342 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 TRPC4Q9UBN4 977 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 CDC14AQ9UNH5 594 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 SH2B3Q9UQQ2 575 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 OARD1Q9Y530 152 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 KCNE2Q9Y6J6 123 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 COL6A6A6NMZ7 2263 aa4.41□□□□□ -1.7
ATXN3-237ENST00000556274 SVILO95425 2214 aa4.4□□□□□ -1.7
ATXN3-237ENST00000556274 A0A0A6YYC8 382 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 A0A0G2JN53 185 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 ARGFXA6NJG6 315 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 ZNF785A8K8V0 405 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 SYCE1LA8MT33 242 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 H3BML4 177 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 I3L1I5 382 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 K7ENP7 123 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 SGK494L7N484 410 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TXNDC9O14530 226 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 MAP2K7O14733 419 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 DSCR3O14972 297 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TAPBPO15533 448 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 PRPF4O43172 522 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 RIPK2O43353 540 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 STK16O75716 305 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 KLHL2O95198 593 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TSPAN12O95859 305 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 HEXBP07686 556 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 SLC35E2BP0CK96 405 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 C1GALT1C1LP0DN25 315 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 GNAZP19086 355 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 FBLP22087 321 aaKnown RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 HRH2P25021 359 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 CXCR2P25025 360 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 AGTR2P50052 363 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 HNMTP50135 292 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 FOXL2P58012 376 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 RAB8AP61006 207 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 RPS15AP62244 130 aaKnown RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 CSNK1G2P78368 415 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 IRF8Q02556 426 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 ACTN3Q08043 901 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 DLG1Q12959 904 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 CHAF1BQ13112 559 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 RAPSNQ13702 412 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 DDX39BQ13838 428 aaKnown RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TGFBIQ15582 683 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 RBBP7Q16576 425 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 SYT16Q17RD7 645 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 NKAIN1Q4KMZ8 207 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 SGO1Q5FBB7 561 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 VWA2Q5GFL6 755 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TOR1AIP1Q5JTV8 583 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 COLEC12Q5KU26 742 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TTC19Q6DKK2 380 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 INO80CQ6PI98 192 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-237ENST00000556274 LCTLQ6UWM7 567 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 SBSNQ6UWP8 590 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 TMPRSS11BQ86T26 416 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 ADAMTSL2Q86TH1 951 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 ASPGQ86U10 573 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 ISCA2Q86U28 154 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 PAQR7Q86WK9 346 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 PDSS2Q86YH6 399 aa4.4□□□□□ -1.71
ATXN3-237ENST00000556274 WDR75Q8IWA0 830 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms