RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 YRDCQ86U90 279 aaKnown RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 MYPOPQ86VE0 399 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 RELL2Q8NC24 303 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 TMEM45BQ96B21 275 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 C14orf79Q96F83 325 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 C16orf45Q96MC5 204 aaPredicted RBP4.5□□□□□ -1.69
VRK1-205ENST00000555402 DEFB118Q96PH6 123 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 TNFRSF13CQ96RJ3 184 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 IL1RAPQ9NPH3 570 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 BARHL2Q9NY43 387 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 TAS2R3Q9NYW6 316 aa4.5□□□□□ -1.69
VRK1-205ENST00000555402 MEI4A8MW99 385 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 KPNA7A9QM74 516 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 ZG16O60844 167 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 ZFAND5O76080 213 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 NXPH4O95158 308 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 FHP07954 510 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 TMOD1P28289 359 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 MTIF2P46199 727 aaKnown RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 ZFP36L2P47974 494 aaKnown RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 GPC3P51654 580 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 CRYBA2P53672 197 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 RPS4XP62701 263 aaKnown RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 RPS27AP62979 156 aaKnown RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 GABPB1Q06547 395 aaPredicted RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 SPP2Q13103 211 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 SLC17A1Q14916 467 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 CLPPQ16740 277 aaPredicted RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 C12orf60Q5U649 245 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 LIPKQ5VXJ0 399 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 UNC5DQ6UXZ4 953 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 MCM10Q7L590 875 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 ITIH5Q86UX2 942 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 GVQW1Q8N7I0 195 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 COLGALT1Q8NBJ5 622 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 AQP11Q8NBQ7 271 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 ZNF485Q8NCK3 441 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 OR56B1Q8NGI3 324 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 C11orf45Q8TAV5 145 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 RDH11Q8TC12 318 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 PCNPQ8WW12 178 aaKnown RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 TMEM37Q8WXS4 190 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 MRPL38Q96DV4 380 aaKnown RBP4.49□□□□□ -1.69
VRK1-205ENST00000555402 NSMCE3Q96MG7 304 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 ANKRD27Q96NW4 1050 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 AGAP4Q96P64 663 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 WDR41Q9HAD4 459 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 THEGQ9P2T0 379 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 IL20RAQ9UHF4 553 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 AURKCQ9UQB9 309 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 NPC1L1Q9UHC9 1359 aa4.49□□□□□ -1.69
VRK1-205ENST00000555402 FAM205AQ6ZU69 1335 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 IGHV3-20A0A0C4DH32 117 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 LOC390937A0A1W2PQ73 354 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 MPTX1A8MV57 137 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 SH2D1BO14796 132 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 CFLARO15519 480 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 ZNF749O43361 778 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 DNAJB1P25685 340 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 CCND2P30279 289 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 NPY2RP49146 381 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 TKTL1P51854 596 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 ZNF131P52739 623 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 MTTPP55157 894 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 ERVK11-1P61568 191 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 RIGQ13278 110 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 SNX1Q13596 522 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
VRK1-205ENST00000555402 FASTKD3Q14CZ7 662 aaKnown RBP4.48□□□□□ -1.69
VRK1-205ENST00000555402 FCN2Q15485 313 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 AGKQ53H12 422 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 STEAP1BQ6NZ63 245 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 SYVN1Q86TM6 617 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 LRRTM1Q86UE6 522 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 SLC22A16Q86VW1 577 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 KCNMB4Q86W47 210 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 RNF148Q8N7C7 305 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 MLKLQ8NB16 471 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 LGMNQ99538 433 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 DCTN5Q9BTE1 182 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 DPH5Q9H2P9 285 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 NDE1Q9NXR1 346 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 EIF3KQ9UBQ5 218 aaKnown RBP4.48□□□□□ -1.69
VRK1-205ENST00000555402 LHX3Q9UBR4 397 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 SLC6A5Q9Y345 797 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 ATG4BQ9Y4P1 393 aa4.48□□□□□ -1.69
VRK1-205ENST00000555402 IGKV3D-20A0A0C4DH25 116 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 TRAFD1O14545 582 aaPredicted RBP4.47□□□□□ -1.69
VRK1-205ENST00000555402 ARPC1BO15143 372 aaKnown RBP4.47□□□□□ -1.69
VRK1-205ENST00000555402 DUSP11O75319 330 aaKnown RBP4.47□□□□□ -1.69
VRK1-205ENST00000555402 FCER2P06734 321 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 GSTA1P08263 222 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 ZCCHC18P0CG32 403 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 SELEP16581 610 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 PMP22Q01453 160 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 DPYSQ14117 519 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 UPP1Q16831 310 aa4.47□□□□□ -1.69
VRK1-205ENST00000555402 TCHHL1Q5QJ38 904 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms