RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 VLDLRP98155 873 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 CARTPTQ16568 116 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 CLPPQ16740 277 aaPredicted RBP8.06□□□□□ -1.12
LINC00641-201ENST00000555379 TMEM52BQ4KMG9 183 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 TPRG1LQ5T0D9 272 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 OR9A4Q8NGU2 314 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 OR14A16Q8NHC5 309 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 KCNE4Q8WWG9 221 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 C12orf43Q96C57 262 aaKnown RBP8.06□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF486Q96H40 463 aaPredicted RBP8.06□□□□□ -1.12
LINC00641-201ENST00000555379 MTERF1Q99551 399 aaKnown RBP8.06□□□□□ -1.12
LINC00641-201ENST00000555379 TPT1P8Q9HAU6 139 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 TMEM138Q9NPI0 162 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 HPF1Q9NWY4 346 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 TMEM9Q9P0T7 183 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 PACSIN3Q9UKS6 424 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 ALG5Q9Y673 324 aa8.06□□□□□ -1.12
LINC00641-201ENST00000555379 OR51F1A6NGY5 319 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CASC3O15234 703 aaKnown RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 AHSGP02765 367 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 PGRP06401 933 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CD46P15529 392 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 AFF3P51826 1226 aaKnown RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CLRN1P58418 232 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 RPS13P62277 151 aaKnown RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 PUM1Q14671 1186 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 RAB39AQ14964 217 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 Q3ZCU0 254 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ARSKQ6UWY0 536 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CHRDL2Q6WN34 429 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 GAREM2Q75VX8 874 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 SHFQ7M4L6 423 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 KIAA0907Q7Z7F0 614 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 METTL4Q8N3J2 472 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 OR2L2Q8NH16 312 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 SLC7A6OSQ96CW6 309 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 C1GALT1C1Q96EU7 318 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 AURKBQ96GD4 344 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF317Q96PQ6 595 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 KAT8Q9H7Z6 458 aaKnown RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 KCNN3Q9UGI6 736 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 MCTS1Q9ULC4 181 aaKnown RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 A8MVJ9 347 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 LOC730098B7Z3J9 87 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 AP1G1O43747 822 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CNTN5O94779 1100 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TGFB1P01137 390 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TNFSF4P23510 183 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 GJA5P36382 358 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 RGS19P49795 217 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 DLX2Q07687 328 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TARDBPQ13148 414 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 NRF1Q16656 503 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 FLYWCH1Q4VC44 716 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 RTL6Q6ICC9 239 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 VASH1Q7L8A9 365 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 SLC22A16Q86VW1 577 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF227Q86WZ6 799 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF781Q8N8C0 355 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 Q8N9G6 341 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 FGF13Q92913 245 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 PKP4Q99569 1192 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 NPAS2Q99743 824 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 PTPN18Q99952 460 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TMEM246Q9BRR3 403 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ANKRA2Q9H9E1 313 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 LOC100506127A0A0U1RQW1 187 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 NUAK1O60285 661 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TRAPPC6AO75865 159 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 EPCAMP16422 314 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 DDCP20711 480 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 MAGEA12P43365 314 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 VSX2P58304 361 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 RACK1P63244 317 aaKnown RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 RELAQ04206 551 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 SOX4Q06945 474 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF234Q14588 700 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF613Q6PF04 617 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 S100A7AQ86SG5 101 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 LNX2Q8N448 690 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ZNF676Q8N7Q3 588 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TEX19Q8NA77 164 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 OR10A6Q8NH74 314 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 PYURFQ96I23 114 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 MS4A4EQ96PG1 132 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CCNL2Q96S94 520 aaPredicted RBP8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TNFRSF10DQ9UBN6 386 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 SH3BGRL2Q9UJC5 107 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 HCN2Q9UL51 889 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 TLR4O00206 839 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CYB5BO43169 146 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 BANF1O75531 89 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 PDYNP01213 254 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 IFNA17P01571 189 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 AHCYP23526 432 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 CHRNA4P43681 627 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 DCAF12Q5T6F0 453 aa8.05□□□□□ -1.12
LINC00641-201ENST00000555379 ALG1LQ6GMV1 187 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms